EST details — SGN-E405454
Search information |
Request: 405454 | Match: SGN-E405454 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C264758 | Clone name: PPC-18-G22 |
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Library Name: PPC | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6 week old
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E405454 | Length: 667 bp (920 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E405454 [] (trimmed)
GTTGAACAAAAATTGAATTACAAAGGCTCTGATAATTGAATCTGAAAAGAAAAATGGGGGACAAGAATGAAAATACTGACAAAGGACTGTTTTCT
AGTCTTGCTGGATATGCTATGGGCCATCACCATGGAGGCTATGGGGCATATCCACCTCAAGGATATGGATATCCACCACAAGGGTACAGGTACCC
GTCTTCTGGCTATCCTCCTCACGGTGGTTACCCGCCAGCAGGATATCCTCCTCCACCAGGGGCATACCCGCCACCTGCATATCCTCCACATGGTG
GATATCCTCCTGCAGGTTATCCACCCTCCTACTATCCGGGTCCATCAGCCTCACATCATGGGCATGGCGGACCTCATATAGGAGGGGGCATGCTA
GCTGGAGGTGCAGCAGCAGCAGTAGCTGCATATGGGGCTCACCATCTCATGCATGGTCGTCCTCATGGCCATTATGGCCATTTTGGCCATCATGG
CAAGTTTAAGCACGGAAAATTCAAGCACGGGAAGTTTGGCAAACATGGCATGTTTGGCAAACACAAGTTCATGGGGCACAAGAGATGGAAGTGAT
TCATTGCCTAAAGTAACAAGATTGCTGCTATCGGTTCTTGCTTTTTGCTTTTCTGTTGACGATGAATTTCTGGTGCATTTTGGGTGTTTATTTAC
TG
AGTCTTGCTGGATATGCTATGGGCCATCACCATGGAGGCTATGGGGCATATCCACCTCAAGGATATGGATATCCACCACAAGGGTACAGGTACCC
GTCTTCTGGCTATCCTCCTCACGGTGGTTACCCGCCAGCAGGATATCCTCCTCCACCAGGGGCATACCCGCCACCTGCATATCCTCCACATGGTG
GATATCCTCCTGCAGGTTATCCACCCTCCTACTATCCGGGTCCATCAGCCTCACATCATGGGCATGGCGGACCTCATATAGGAGGGGGCATGCTA
GCTGGAGGTGCAGCAGCAGCAGTAGCTGCATATGGGGCTCACCATCTCATGCATGGTCGTCCTCATGGCCATTATGGCCATTTTGGCCATCATGG
CAAGTTTAAGCACGGAAAATTCAAGCACGGGAAGTTTGGCAAACATGGCATGTTTGGCAAACACAAGTTCATGGGGCACAAGAGATGGAAGTGAT
TCATTGCCTAAAGTAACAAGATTGCTGCTATCGGTTCTTGCTTTTTGCTTTTCTGTTGACGATGAATTTCTGGTGCATTTTGGGTGTTTATTTAC
TG
Unigenes |
Current Unigene builds | |||||
[SGN-E405454] | SGN-U273552 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T263025 [Download] [View] | Facility Assigned ID: PPCCR47TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |