EST details — SGN-E405708
Search information |
Request: 405708 | Match: SGN-E405708 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C257049 | Clone name: PPI-1-I20 |
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Library Name: PPI | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6-week old leaf
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E405708 | Length: 595 bp (903 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E405708 [] (trimmed)
ATGGAGTGGAAAGAAGGAAACATTTCCACAGCTCGAGAACTATACCAGAAAGCTCTATCGATCAACTCAACTACTGAAAGTGCAGCACGCTGTCT
TCAGGCTTGGGGTGTTTTGGAGCAAAGAGCTGGAAATCTATCAGCTGCTCGAAGATTATTTAGATCGTCTCTGAACATAAACTCTCAGAGCTATA
TAACATGGATGACATGGGCAAATTTGGAGGAAGATCAAGGTAACTCTATCCGTGCAGAGGAAATTCGTAACCTCTACTTTCAACAGCGTACTGAA
GTTGTTGATGATGAGTCGTGGATTATGGGCTTCTTAGACGTCATTGATCCAGCGATTGATAGCATAAAGAGGCTCTTGAATTTAGATCAAAATTC
TTATTACAAGGTAAAAGAGTCTACTTCTAATACTACTGCTGGAGACGACGTTGAGGGGAGCACAGAAGAATCAGCTTCCCCCTCCTCGGCTAACG
TCAATGACAATAACATAGATACAGGAAGTGGCTTTGATTTAGATGATTNTATCCGTGTAATGCTGTCTTTGGACCCTTCAAAACTGGAAGTTCAG
CTTACAACATCTCTGAAGGACCCTC
TCAGGCTTGGGGTGTTTTGGAGCAAAGAGCTGGAAATCTATCAGCTGCTCGAAGATTATTTAGATCGTCTCTGAACATAAACTCTCAGAGCTATA
TAACATGGATGACATGGGCAAATTTGGAGGAAGATCAAGGTAACTCTATCCGTGCAGAGGAAATTCGTAACCTCTACTTTCAACAGCGTACTGAA
GTTGTTGATGATGAGTCGTGGATTATGGGCTTCTTAGACGTCATTGATCCAGCGATTGATAGCATAAAGAGGCTCTTGAATTTAGATCAAAATTC
TTATTACAAGGTAAAAGAGTCTACTTCTAATACTACTGCTGGAGACGACGTTGAGGGGAGCACAGAAGAATCAGCTTCCCCCTCCTCGGCTAACG
TCAATGACAATAACATAGATACAGGAAGTGGCTTTGATTTAGATGATTNTATCCGTGTAATGCTGTCTTTGGACCCTTCAAAACTGGAAGTTCAG
CTTACAACATCTCTGAAGGACCCTC
Unigenes |
Current Unigene builds | |||||
[SGN-E405708] | SGN-U278265 | Solanum tuberosum | Build 4 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T252783 [Download] [View] | Facility Assigned ID: PPIAB58TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |