EST details — SGN-E405993
Search information |
Request: 405993 | Match: SGN-E405993 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C260232 | Clone name: PPI-2-G8 |
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Library Name: PPI | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6-week old leaf
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E405993 | Length: 494 bp (1011 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E405993 [] (trimmed)
GGAGCGCAGGCAATGAAGAGAATTCCACGAATCAAGTTTCCACAGAGGCATTCAAAGCATTCTGGTACCACATCACAGAATTCCCAACATCAGAA
AACTCCAGCAGCTGAAGAAACTCCTCGAACATTTTTCTCAAGGTCCCCACCTAGCATGTCTGTTGCAGGGAAGGCTTCTGATCAACCCAAAAGAA
CACCAGTTACTCAGGAGGAAATTGAATCCATTCTGTTGGGTGGCTGCATCTAACTTCAAAGCAAATTACCTTCAGAGAGATGACACAGCTCACAA
CTGCACGCTCATGTTTAGTGACTGGTTGACTACATTTTGGTGTTTATGTTTTAGCTGTTGTACTTCTTGAAACCAGTGACATGATTGTTAATAAT
TCATTATGCACGGAATGGTTATCGAGACCTGGATTGGCAAACTACTGTGTACATTGATAGGCCTTTTTTTTTTTNNAAAAAAAAANNNAAAAAAA
AANNAAANAAAAAAAAAAA
AACTCCAGCAGCTGAAGAAACTCCTCGAACATTTTTCTCAAGGTCCCCACCTAGCATGTCTGTTGCAGGGAAGGCTTCTGATCAACCCAAAAGAA
CACCAGTTACTCAGGAGGAAATTGAATCCATTCTGTTGGGTGGCTGCATCTAACTTCAAAGCAAATTACCTTCAGAGAGATGACACAGCTCACAA
CTGCACGCTCATGTTTAGTGACTGGTTGACTACATTTTGGTGTTTATGTTTTAGCTGTTGTACTTCTTGAAACCAGTGACATGATTGTTAATAAT
TCATTATGCACGGAATGGTTATCGAGACCTGGATTGGCAAACTACTGTGTACATTGATAGGCCTTTTTTTTTTTNNAAAAAAAAANNNAAAAAAA
AANNAAANAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E405993] | SGN-U272880 | Solanum tuberosum | Build 4 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T253068 [Download] [View] | Facility Assigned ID: PPIAF40TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.988 | Expected Error Rate: 0.0334 | Quality Trim Threshold: 12.5 |