EST details — SGN-E406918
Search information |
Request: 406918 | Match: SGN-E406918 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C261250 | Clone name: PPI-5-M14 |
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Library Name: PPI | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6-week old leaf
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E406918 | Length: 474 bp (900 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E406918 [] (trimmed)
TTGTGAGAATTGGGGCTTCTTTGAGTTGGTGAACCATGGAATTCCACATGAAGTAATGGACCCAGTAGATAAAATGACAAAGGGACATTACAAGA
AGTGCATGGAACAGAGGTTCAAAGAATTGGTAGCAAGCAAAGGTCTTGAAGCTGTTCAAGCTGAGGTTACTGATTTAGAATGGGAAAGCACATTC
TTCTTGCGCCATCTTCCTACTTCTAATATCTCTCAAGTACCCGATCTTGATGGCGAATACAGAGAGGTAATGAGAGATTTTGCTAAAAGATTGGA
GAAATTGGCAGAGGAGTTACTTGACTTGCTATGTGAAAATCTTGGACTTGAAAAAGGTTACTTGAAAAATGCCTTTTATGGATCAAAAGGTCCCA
ATTTTGGGACTAAAGTTAGCAACTATCCACCATGTCCTAAGCCTGATTTGATAAAGGGACTCCGCGCTCATACAGACGCTGNTGGCATCATACT
AGTGCATGGAACAGAGGTTCAAAGAATTGGTAGCAAGCAAAGGTCTTGAAGCTGTTCAAGCTGAGGTTACTGATTTAGAATGGGAAAGCACATTC
TTCTTGCGCCATCTTCCTACTTCTAATATCTCTCAAGTACCCGATCTTGATGGCGAATACAGAGAGGTAATGAGAGATTTTGCTAAAAGATTGGA
GAAATTGGCAGAGGAGTTACTTGACTTGCTATGTGAAAATCTTGGACTTGAAAAAGGTTACTTGAAAAATGCCTTTTATGGATCAAAAGGTCCCA
ATTTTGGGACTAAAGTTAGCAACTATCCACCATGTCCTAAGCCTGATTTGATAAAGGGACTCCGCGCTCATACAGACGCTGNTGGCATCATACT
Unigenes |
Current Unigene builds | |||||
[SGN-E406918] | SGN-U269238 | Solanum tuberosum | Build 4 | 23 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T253993 [Download] [View] | Facility Assigned ID: PPIAR79TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0206 | Quality Trim Threshold: 14.5 |