EST details — SGN-E406942
| Search information |
| Request: 406942 | Match: SGN-E406942 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C261083 | Clone name: PPI-5-D9 |
| ||
| Library Name: PPI | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6-week old leaf
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E406942 | Length: 788 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E406942 [] (trimmed)
CAATCCATTTTTTCTACTTTCTCTCTCTAGAAAAAGTGCATTTTAGCTTAAATTTTCTGCGAACAATTTTTTTTTTCATCGATTCAATTTCAATG
GCTAACAGCAATCTTCCTCGAAGAATTATCAAGGAAACTCAGCGTCTTCTAAGTGAACCTGCACCAGGAATAAGTGCTTCTCCCTCAGAAGAAAA
TATGCGATATTTTAATGTCATGATTCTTGGTCCAACACAGTCTCCGTATGAAGGAGGTGTTTTCAAACTGGAACTCTTTTTGCCTGAAGAGTACC
CAATGGCCGCGCCAAAGGTTCGATTCCTCACCAAAATCTATCATCCGAATATTGATAAGCTTGGAAGGATATGCCTTGATATTCTCAAGGACAAG
TGGAGTCCTGCTCTTCAGATTCGTACCGTTCTTTTGAGCATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAGAACATTGC
AAAGCACTGGAAGTCAAACGAGGCTGAAGCTGTTGAAACGGCTAAAGAATGGGCGCGTCTTTATGCAAGTGGTGCCTGAAGACCATAATTAAGTG
ATTTTCTAACGGAAAAAAAACCCCGTGGAATGTTATTGATCCACTGTTTAATCCGAATGGGACTTGGGAGGACTGAAGCTGAATGCTTCAAATTA
CCCATCTAGAATTGTTGCCCTGTCCTTGAAATTGTACAATTGAACGATGTACCTTTTTTTCAGTTGAAATTGGTCTTTACTACTATATCAGAAAC
GGTACTAAAGTATTATCTCAAAAAAAAA
GCTAACAGCAATCTTCCTCGAAGAATTATCAAGGAAACTCAGCGTCTTCTAAGTGAACCTGCACCAGGAATAAGTGCTTCTCCCTCAGAAGAAAA
TATGCGATATTTTAATGTCATGATTCTTGGTCCAACACAGTCTCCGTATGAAGGAGGTGTTTTCAAACTGGAACTCTTTTTGCCTGAAGAGTACC
CAATGGCCGCGCCAAAGGTTCGATTCCTCACCAAAATCTATCATCCGAATATTGATAAGCTTGGAAGGATATGCCTTGATATTCTCAAGGACAAG
TGGAGTCCTGCTCTTCAGATTCGTACCGTTCTTTTGAGCATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAGAACATTGC
AAAGCACTGGAAGTCAAACGAGGCTGAAGCTGTTGAAACGGCTAAAGAATGGGCGCGTCTTTATGCAAGTGGTGCCTGAAGACCATAATTAAGTG
ATTTTCTAACGGAAAAAAAACCCCGTGGAATGTTATTGATCCACTGTTTAATCCGAATGGGACTTGGGAGGACTGAAGCTGAATGCTTCAAATTA
CCCATCTAGAATTGTTGCCCTGTCCTTGAAATTGTACAATTGAACGATGTACCTTTTTTTCAGTTGAAATTGGTCTTTACTACTATATCAGAAAC
GGTACTAAAGTATTATCTCAAAAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E406942] | SGN-U271684 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T254017 [Download] [View] | Facility Assigned ID: PPIAS17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |
Working
