EST details — SGN-E410169
Search information |
Request: 410169 | Match: SGN-E410169 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C259207 | Clone name: PPI-16-A24 |
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Library Name: PPI | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6-week old leaf
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E410169 | Length: 780 bp (938 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E410169 [] (trimmed)
CCACTATCCACACACTCCCTCTCTATCTCTCTGCTCTTTCCATGGCTGCTGTGTTAGAAACCATTACAGTACCACGCGCATCGGCGCTTCCGTCG
TCGTCGTTTGCTCCGGTAGCTGGTTATTCTTTCTCCGGTCCTCGTTCCTCTGTTAGATTCTCTCAATTCAGCGGCCTTAAGATCCAGCCAATTCG
CTCATCCGTATCCACTAGCTCATGCTCTAAAATCATTCCCCGAGGAGGACGAGTCGTTTGCGAAGCTCAGAATACCGCCGTCGAAGTGGCTGCTG
TTAGTGATAAAACATGGAAGACACTTGTAGTTGAGTCTACTGTACCTGTACTGGTTGAATTTTGGGCTCCGTGGTGTGGTCCATGCCGAATGATC
CACCCCGTCATTGATGAACTAGCAAAGGAATATGTTGGCAAGCTTACATGCTTGAAGCTGAACACGGATGAAAGTCCTTCCATTGCAACCGAATT
TGGAATCCGAAGCATTCCAACTGTGATGATATTCAAGAATGGAGAGAAGAAAGATGCAATCATTGGTGCAGTTCCTAAATCAACACTTACCACCT
CCATAGAAAAATTCTTGTAAAATGTTGCATATATAGATATATTATCNTGGGAATTTACTCATATATTCCCTTTCAGCCTCCAGTGCGGCAATTGT
TTAAGTAAACCAGTAATGCTCCCTGTATAGTTGGGGTGCATTGTGTTTCCCCTTTACTTAACGTTACGTTGATTGGTTCTCATGTTTAGAAATTC
ACTTTTATTTATAAAAAAAA
TCGTCGTTTGCTCCGGTAGCTGGTTATTCTTTCTCCGGTCCTCGTTCCTCTGTTAGATTCTCTCAATTCAGCGGCCTTAAGATCCAGCCAATTCG
CTCATCCGTATCCACTAGCTCATGCTCTAAAATCATTCCCCGAGGAGGACGAGTCGTTTGCGAAGCTCAGAATACCGCCGTCGAAGTGGCTGCTG
TTAGTGATAAAACATGGAAGACACTTGTAGTTGAGTCTACTGTACCTGTACTGGTTGAATTTTGGGCTCCGTGGTGTGGTCCATGCCGAATGATC
CACCCCGTCATTGATGAACTAGCAAAGGAATATGTTGGCAAGCTTACATGCTTGAAGCTGAACACGGATGAAAGTCCTTCCATTGCAACCGAATT
TGGAATCCGAAGCATTCCAACTGTGATGATATTCAAGAATGGAGAGAAGAAAGATGCAATCATTGGTGCAGTTCCTAAATCAACACTTACCACCT
CCATAGAAAAATTCTTGTAAAATGTTGCATATATAGATATATTATCNTGGGAATTTACTCATATATTCCCTTTCAGCCTCCAGTGCGGCAATTGT
TTAAGTAAACCAGTAATGCTCCCTGTATAGTTGGGGTGCATTGTGTTTCCCCTTTACTTAACGTTACGTTGATTGGTTCTCATGTTTAGAAATTC
ACTTTTATTTATAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E410169] | SGN-U270896 | Solanum tuberosum | Build 4 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T257244 [Download] [View] | Facility Assigned ID: PPICJ12TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.984 | Expected Error Rate: 0.0105 | Quality Trim Threshold: 12.5 |