Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E417271

Search information 
Request: 417271Match: SGN-E417271
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C271223Clone name: STM-25-I23
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C271223 [STM-25-I23] Trace: SGN-T269409 EST: SGN-E417272 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E417271Length: 576 bp (1042 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E417271 [] (trimmed) GAACTATGCCCTTTTGGTCTATGGGGTATCCCCCTTTTCCGCCTTTCTTTCTTTCATCTTCCTAATTCCTCAGGTAAGCTTCATGCCAGTCTGAC
TAAGGTAAGGGGGGAAGACCTCATTTCGTCATTCATATCTATTCGTCTTAGCCCTGCTTCGGCGATTCAATCCGACATTTCATTTCCCCCTTCAT
CATTTGATTTTTCGCATCTAAGAGCTGATCTTGCAAAAGGAGTACAGCGCGATAACAAGCGATTTGTGATCAATAAAAAGTACCACCGGATTCTG
TACCCATCAGTCTTGGATCCTCACCTTAGACAGTTTCATTTGGTTATGAAAGAAAGGCCTTATCCCTAGCGTTAAGGTCTCTATCAAGCACTCTT
CTAAAAGGAATGTCATGATACAAAGTGGGCTGGTCATCCGGGGCAACAAGGCACGCGAGCATGCCATTCATGAAAGTCTTACCTATAGAGTAAGT
AGCTAAAGCAAGAGAGCAATCAAGCAAGCGATTGTAGGTACGCTAAGTTTATATATTATCTTATATAAGATAAGCGGATTGTTGTGGAACTAGAT
CCTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E417271] SGN-U278126 Solanum tuberosum Build 4 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T269408 [Download] [View] Facility Assigned ID: STMDS60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5