Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E418553

Search information 
Request: 418553Match: SGN-E418553
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C271772Clone name: STM-27-F10
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C271772 [STM-27-F10] Trace: SGN-T270691 EST: SGN-E418554 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E418553Length: 533 bp (896 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E418553 [] (trimmed) AAACAACAGATCCCTTCTCCCTCTCTAAATTCTCCATTTTTCTTCCTCATTTCTTTTTACAAATTTTATTCATGGCATCCACTGGGCACACCAAT
CTCAATGCAAAACTTGTGTTGTTAGGTGACATGGGAGCTGGTAAATCAAGCTTGGTTATACGATTCATAAAGGGTCAATTCCTTGAATTTCAAGA
ATCGACGATTGGGGCGGCTTTCTTTTCGTCTACACTGGCAGTTAATAATGCTACGGTGAAGTTTGAGATATGGGATACTGCTGGGCAGGAGAGGT
ACCATAGCTTAGCACCTATGTATTATAGAGGAGCTGCAGCTGCTATTATTGTCTATGATATCACTAGCTCGGATTCATTTGCAAAGGCAAAGAAA
TGGGTGCAAGAATTGCAGAAGCAAGGTAATTCTAACATGATCATGGCTCTTGCTGGCAATAAGGCAGATCTAGAAGATCGAAGGAACGTTCCTGC
AGAAGTAAGTTGTACTTTTTGGAGGCACGCTTGTACGCGGAGGAAAATGGCCTCTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E418553] SGN-U269359 Solanum tuberosum Build 4 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T270690 [Download] [View] Facility Assigned ID: STMED29TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5