EST details — SGN-E420838
Search information |
Request: 420838 | Match: SGN-E420838 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C273121 | Clone name: STM-31-H16 |
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Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C273121 [STM-31-H16] | Trace: SGN-T272976 | EST: SGN-E420839 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E420838 | Length: 660 bp (963 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E420838 [] (trimmed)
ATGATACTACCGCAGCCAATGGTGGGAATGTTACTGTTGAAGAATTCAAAACTGGCATTGATATTAATATCCCACACCAAAATGATACAGATGAT
GAGATAGCTGATGTGGATGTAAGTGATGATGATGAGGACAAGGGCCGCAATGCTGCAGAAGAACTTAGAGCTCAAGTAAATGCAGAGGGAAAAGA
GAATCATACTTCGAGTTCTAGCAGTAGCAGCAGCAGTGACAGTAGTGGAAGTGGGAGTGGGAGCGGGAGTGGAAGTGGAAGTGATAGTGCAAGCA
GCAGCAGTGACAATGAAAGCAGTGACACGGTCAACTCTATCTGAGAACTTAAAGTATTTTGAGGGTGAATGTCTCAAGTTTGAAATAATTCAAAG
AGAAGCCACTACATTGCTTTTAGGTTCAGTTGATCGACAATGCAGTCGAGGATCAGGCCAAATCTCTATTGGCATGTCCTCTTATTTTGCTCTTC
TTCTTGCAGTATAACTTTCTCCTTCCTGCTATTCTCCTTCTATTTATCTCATTTTTAGACTTTTATGTAAGAAGTACAGAAAACTGAAGAAGTTT
GTACGACAGGAAAGATGATTACTGTATCTGTTGTATTGTAAATGCATCAAATATTTTCAAGCCTGGCACCTTTTAGTTCTCATTTACTGG
GAGATAGCTGATGTGGATGTAAGTGATGATGATGAGGACAAGGGCCGCAATGCTGCAGAAGAACTTAGAGCTCAAGTAAATGCAGAGGGAAAAGA
GAATCATACTTCGAGTTCTAGCAGTAGCAGCAGCAGTGACAGTAGTGGAAGTGGGAGTGGGAGCGGGAGTGGAAGTGGAAGTGATAGTGCAAGCA
GCAGCAGTGACAATGAAAGCAGTGACACGGTCAACTCTATCTGAGAACTTAAAGTATTTTGAGGGTGAATGTCTCAAGTTTGAAATAATTCAAAG
AGAAGCCACTACATTGCTTTTAGGTTCAGTTGATCGACAATGCAGTCGAGGATCAGGCCAAATCTCTATTGGCATGTCCTCTTATTTTGCTCTTC
TTCTTGCAGTATAACTTTCTCCTTCCTGCTATTCTCCTTCTATTTATCTCATTTTTAGACTTTTATGTAAGAAGTACAGAAAACTGAAGAAGTTT
GTACGACAGGAAAGATGATTACTGTATCTGTTGTATTGTAAATGCATCAAATATTTTCAAGCCTGGCACCTTTTAGTTCTCATTTACTGG
Unigenes |
Current Unigene builds | |||||
[SGN-E420838] | SGN-U271748 | Solanum tuberosum | Build 4 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T272975 [Download] [View] | Facility Assigned ID: STMET44TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 12.5 |