EST details — SGN-E420839
Search information |
Request: 420839 | Match: SGN-E420839 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C273121 | Clone name: STM-31-H16 |
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Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C273121 [STM-31-H16] | Trace: SGN-T272975 | EST: SGN-E420838 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E420839 | Length: 727 bp (857 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E420839 [] (trimmed)
TTTTTTTTTTGTACCATCAACCAACGAAAATGAAGGTTTCTTTCACATTTCTTCTCTTCTCCAACAACCAGTAAATGAGAACTAAAAGGTGCCAG
GCTTGAAAATATTTGATGCATTTACAATACAACAGATACAGTAATCATCTTTCCTGTCGTACAAACTTCTTCAGTTTTCTGTACCTCTTACATAA
AAGTCTAAAAATGAGATAAATAGAAGGAGAATAGCAGGAAGGAGAAAGTTATACTGCAAGAAGAAGAGCAAAATAAGAGGACATGCCAATAGAGA
TTTGGCCTGATCCTCGACTGCATTGTCGATCAACTGAACCTAAAAGCAATGTAGTGGCTTCTCTTTGAATTATTTCAAACTTGAGACATTCACCC
TCAAAATACTTTAAGTTCTCAGATAGAGTTGACCGTGTCACTGCTTTCATTGTCACTGCTGCTGCTTGCACTATCACTTCCACTTCCACTCCCGC
TCCCACTCCCACTTCCACTACTGTCACTGCTGCTGCTACTGCTAGAACTCGAAGTATGATTCTCTTTTCCCTCTGCATTTACTTGAGCTCTAAGT
TCTTCTGCAGCATTGCGGCCCTTGTCCTCATCATCATCACTTACATCCACATCAGCTATCTCATCATCTGTATCATTTTGGTGTGGGATATTAAT
ATCAATGCCAGTTTTGAATTCTTCAACAGTAACATTCCCACCATTGGCTGCGGTAGTATCAT
GCTTGAAAATATTTGATGCATTTACAATACAACAGATACAGTAATCATCTTTCCTGTCGTACAAACTTCTTCAGTTTTCTGTACCTCTTACATAA
AAGTCTAAAAATGAGATAAATAGAAGGAGAATAGCAGGAAGGAGAAAGTTATACTGCAAGAAGAAGAGCAAAATAAGAGGACATGCCAATAGAGA
TTTGGCCTGATCCTCGACTGCATTGTCGATCAACTGAACCTAAAAGCAATGTAGTGGCTTCTCTTTGAATTATTTCAAACTTGAGACATTCACCC
TCAAAATACTTTAAGTTCTCAGATAGAGTTGACCGTGTCACTGCTTTCATTGTCACTGCTGCTGCTTGCACTATCACTTCCACTTCCACTCCCGC
TCCCACTCCCACTTCCACTACTGTCACTGCTGCTGCTACTGCTAGAACTCGAAGTATGATTCTCTTTTCCCTCTGCATTTACTTGAGCTCTAAGT
TCTTCTGCAGCATTGCGGCCCTTGTCCTCATCATCATCACTTACATCCACATCAGCTATCTCATCATCTGTATCATTTTGGTGTGGGATATTAAT
ATCAATGCCAGTTTTGAATTCTTCAACAGTAACATTCCCACCATTGGCTGCGGTAGTATCAT
Unigenes |
Current Unigene builds | |||||
[SGN-E420839] | SGN-U271748 | Solanum tuberosum | Build 4 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T272976 [Download] [View] | Facility Assigned ID: STMET44TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0024 | Quality Trim Threshold: 12.5 |