Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E429773

Search information 
Request: 429773Match: SGN-E429773
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C278306Clone name: STM-52-J17
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C278306 [STM-52-J17] Trace: SGN-T281909 EST: SGN-E429772 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E429773Length: 741 bp (899 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E429773 [] (trimmed) TTTTTTTTTTTTTTTCAAAAGAATTTGTTTTCCTAACTGAGGATCATTCAGTTGTTAATACATAAATCAAATCAAAACAAAGGAAACACTAGAGT
GGCCTACATGGTGAGCAACAATTATACAGAAAAACCAAGCCACCTGAAACACTTTTTGAGGGATCGTTAGTAGTTCCGAATAAGACAGATGAGAA
CCTTCTACTTCCTCCGAGTCAAAGGGATATAAGGGGGGGGATGTTACAACGGGAATTATGATGAGCCATTATCGTTGGACCTATAGTTGATCACA
ATATCGAGCAGGCCTTTTGAGATTTCCCCTTCTTTTTCTTCGTCTTGGGAGGCTGGAGGACGACCTTAATGGCAGCATCAAACACAGCTTTCACA
TTCTGTTGTGTTTTTGAACTACATTCAACGTAAGATGGTGCACCTATTGTTTTCCTTAGCTCCTCACCCTGAGCAGTAGTAATCGGCACAGCACC
AGGATGGTCTACGAAAAATTGCTTGTCATCCCGAAGATCAAGTTTTGTTCCAACAAGTACAATTGGGACACCAGGAGCATAGTGCTTCAACTCAG
GAATCCACTTCTTGGAGACATTCTCATAGCTGGCTTTACTAATGAGAGAGAATGCCAAAATGAAAACATCGGCCCCACGGTAACTCAGAGGTCTT
AATCTGTTGTAGTCCTCCTGTCCAGCAGTATCCCACAACCCTAGGTTGACAGTGGCTCCATTGACAACCACATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E429773] SGN-U271453 Solanum tuberosum Build 4 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T281910 [Download] [View] Facility Assigned ID: STMHY57TV
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5