Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E444860

Search information 
Request: 444860Match: SGN-E444860
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C215203Clone name: cSTA-44-M19
nocartOrdering Not Available
Library Name: cSTAOrganism: Solanum tuberosum

Tissue: Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers
Development Stage: 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C215203 [cSTA-44-M19] Trace: SGN-T209502 EST: SGN-E444861 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E444860Length: 673 bp (926 bp untrimmed)
Status: Current VersionDirection: Unknown
>SGN-E444860 [] (trimmed) GAAGCTCTCTCTTTTCTTCATCTTCAAAAGATTCTAAAGCATCATGGGTAAGGAAAAGATTCACATCAGTATTGTGGTAATTGGCCACGTCGACT
CTGGAAAGTCGACTACCACAGGTCACTTGATCTACAAGCTTGGTGGTATTGACAAACGTGTTATTGAGAGGTTCGAGAAGGAAGCTGCTGAGATG
AACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCCGAACGTGAGCGTGGTATCACCATTGATATTGCTTTGTGGAAGTTTGA
GACCACTAAGTACTACTGCACTGTGATTGATGCCCCCGGACACAGGGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGACTGTGCTG
TCCTCATTATTGACTCCACCACTGGTGGTTTTGAAGCTGGTATCTCTAAAGATGGTCAGACACGTGAACATGCATTGCTTGCTTTTACCCTTGGT
GTCAAACAAATGATTTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGCTAGGTATGATGAAATCGTGAAGGAAGTTTCTTC
CTATCTCAAGAAGGTCGGTTACAACCCTGACAAATCCCATTCGTCCCCATCTTCGGTTTTGAAGGAGATAACATGATTGAGAAGTCTACCAACCT
TGACTGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E444860] SGN-U277726 Solanum tuberosum Build 4 467 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T209501 [Download] [View] Facility Assigned ID: PSTGQ82THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5