Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E452418

Search information 
Request: 452418Match: SGN-E452418
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C239388Clone name: cSTS-16-B20
nocartOrdering Not Available
Library Name: cSTSOrganism: Solanum tuberosum

Tissue: sprouting eyes from tubers
Development Stage: 12-14 weeks post harvest

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E452418Length: 770 bp (874 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E452418 [] (trimmed) TTTTCTTTGATTCTGTGGTCTGTAAATCATGGCTACACAAGGTCAAGTCATCACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCTTTGG
TGATTGAGGATGTGCAGGTGGCTCCACCGCAAGCCGGTGAAGTTCGGGTTAAAGTTTTGTATACTGCTCTCTGCCATACCGATGCTTATACCTGG
AGCGGCAAGGATCCTGAGGGTCTCTTTCCATGTGTTCTTGGTCATGAGGCTGCAGGGATAGTAGAAAGTGTTGGTGAGGGAGTGACTGAGGTTCA
GCCAGGAGACCATGTTATACCTTGCTACCAGGCAGAATGCAGAGAATGCAAGTTCTGCAAATCAGGAAAGACCAATCTTTGTGGTAAAGTAAGGG
CTGCTACTGGAGTGGGAGTTATGATGAACGACCGCAAGAGTCGATTTTCTATCAATGGAAAACCGATCTATCATTTCATGGGAACTTCAACCTTC
AGTCAGTACACTGTTGTCCATGATGTTAGTGTTGCAAAGATTGACCCAGCAGCTCCTCTGGAGAAAGTCTGCCTTCTCGGGTGTGGGTGTTCCAA
CTGGCCTTGGAGCTGTTTGGAACACTGCAAAAGTTGAACCAGGTTCCATTGTTGCCGTCTTTGGCCTGGGAACAGTTGGTCTTGCTGTGGGCGGA
GGTGCAAAAGCTGCTGGTGCTTCACGAATTATTGGAATTGATATTGACAGCAAAAAGTTCGATAGAGCCAAAAAATTTTGGTGTGACTGAATTCA
TCAATCCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E452418] SGN-U269545 Solanum tuberosum Build 4 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T237994 [Download] [View] Facility Assigned ID: PEYCL10TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5