Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E453679

Search information 
Request: 453679Match: SGN-E453679
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C241023Clone name: cSTS-20-F2
nocartOrdering Not Available
Library Name: cSTSOrganism: Solanum tuberosum

Tissue: sprouting eyes from tubers
Development Stage: 12-14 weeks post harvest

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E453679Length: 749 bp (876 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E453679 [] (trimmed) CACACTCAACCCACCCACCATGACAGCAAAATCAACTAACCCCATCTTCTTCTTCACTCTTTTCTTCCTCATTTTCACATTAACCCCATCTTTTT
CCATTGAAAATGATGTTAAATGTCTTGAAGGTATCAAATCTGCACTTTCTGACCCTTTAAACAAGCTCTCATCTTGGTCATTCTCAAACACTTCT
GTAGCTTCAATTTGTAAACTTGTTGGTGTTTCTTGCTGGAATGAGAAAGAAAACCGCCTTCTTTCTCTTCAACTTCCTTCAATGTCTTTATCCGG
TTCACTCCCACCTGCCCTTCAGTTCTGTACTTCTCTTCAATCTCTTGATCTCTCTGGTAACTCTTTTTCCGGTCCAATCCCGGTTCAAATCTGTT
CTTGGTTACCTTATCTCGTCAATCTCGATCTCTCCAGCAACTCTTTCTCCGGTTCCATACCCCCTGAGTTTATTAACTGCAAATTCTTGAACACC
CTTATTCTAAATGACAACAAACTTACTGGGTCGATCCCATTTGAGATCGGCCGGCTCGACCGGTTGAAACGGTTCAGTGTGTCCAACAATGGCCT
TTCCGGTTCAATTCCTGATGATTTAGACCGGTTTTCGAAAGATGATTTTGATGGGAATGATNGGCTTTGTGGGAATCCAATTGGATCTAAATGTA
GTAATTTGAGTAACAAAAATCTTGNTATTATTATAGCTGCTGGTGTTTTTTGGTGCTGCTGCATCACTGATTCTTGGATTTGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E453679] SGN-U285317 Solanum tuberosum Build 4 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T239255 [Download] [View] Facility Assigned ID: PEYDB25TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0167 Quality Trim Threshold: 14.5