EST details — SGN-E459386
Search information |
Request: 459386 | Match: SGN-E459386 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C252811 | Clone name: cPRO-27-P15 |
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Library Name: cPRO | Organism: Solanum tuberosum |
Tissue: roots
Development Stage: in vitro grown stem cuttings
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E459386 | Length: 790 bp (879 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E459386 [] (trimmed)
TTCAAAATCTCTTCTCTAGAAAAAAAAAATTATGGGAAGAGCTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGGCCATGGTCACCAGAAGAAG
ATGCAAAATTAAAAGAATATATTGACAAATTTGGCACTGGTGGAAATTGGATTGTTCTTCCACAAAAAGCCGGGCTAAGAAAATGTGGAAAAAGC
TGCAGATTAAGATGGCTAAATTATCTTAGGCCAAATATTAAACACGGAGAGTTTTCAGAGGAAGAAGACAGAATCATTTGCAGCCTTTATGCTAA
CATTGGAAGCAGGTATATACATATTTTTTCTACTAAAATTTCAATCATTATTAAATTTTGATCACATAATTTCAAAAGTACGATGAGTTCGCTGC
TAAAAATTTTAAAATTCAAACACATAAATTTTGAATCATGGATCAACTTCTAAGTAGGGGGATGTTGAGAACAAGTTATAGATAGTTCGAGTGAA
TCACTTTAATTTCCTCCTTCTAGCTTCGTACCTAAATGGGATGTGATAAAATTTCAAATTAAACTCGAAATGATTCAAATCTTGAATTAGTCTCT
GCTTCTAACAACTAGCATGATCCTAGAAATATATACTTTGCATGCATGAGTATTACTTTCAAGAATTAAAGTCTAGTTAATTAGTACTAGTAACT
TTCATGTTTTTGGTCATGAAAATTAATTAAACTAATCTCGATATCTAAAAAACATATGCAGGTGGTCAATAATAGCAGCTCAATTACCAGGCAGG
ACAGATAATGATATCAAAAACTATTGGGAA
ATGCAAAATTAAAAGAATATATTGACAAATTTGGCACTGGTGGAAATTGGATTGTTCTTCCACAAAAAGCCGGGCTAAGAAAATGTGGAAAAAGC
TGCAGATTAAGATGGCTAAATTATCTTAGGCCAAATATTAAACACGGAGAGTTTTCAGAGGAAGAAGACAGAATCATTTGCAGCCTTTATGCTAA
CATTGGAAGCAGGTATATACATATTTTTTCTACTAAAATTTCAATCATTATTAAATTTTGATCACATAATTTCAAAAGTACGATGAGTTCGCTGC
TAAAAATTTTAAAATTCAAACACATAAATTTTGAATCATGGATCAACTTCTAAGTAGGGGGATGTTGAGAACAAGTTATAGATAGTTCGAGTGAA
TCACTTTAATTTCCTCCTTCTAGCTTCGTACCTAAATGGGATGTGATAAAATTTCAAATTAAACTCGAAATGATTCAAATCTTGAATTAGTCTCT
GCTTCTAACAACTAGCATGATCCTAGAAATATATACTTTGCATGCATGAGTATTACTTTCAAGAATTAAAGTCTAGTTAATTAGTACTAGTAACT
TTCATGTTTTTGGTCATGAAAATTAATTAAACTAATCTCGATATCTAAAAAACATATGCAGGTGGTCAATAATAGCAGCTCAATTACCAGGCAGG
ACAGATAATGATATCAAAAACTATTGGGAA
Unigenes |
Current Unigene builds | |||||
[SGN-E459386] | SGN-U276527 | Solanum tuberosum | Build 4 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T244962 [Download] [View] | Facility Assigned ID: PROEC92TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.935 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |