Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E459565

Search information 
Request: 459565Match: SGN-E459565
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C252876Clone name: cPRO-28-C2
nocartOrdering Not Available
Library Name: cPROOrganism: Solanum tuberosum

Tissue: roots
Development Stage: in vitro grown stem cuttings

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E459565Length: 693 bp (923 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E459565 [] (trimmed) GTCAGACCCGTGAACATGCATTGCTTGCTTTCACCCTTGGTGTCAAGCAAATGATTTGCTGCTGCAACAAGATGGATGCTACCACCCCCAAGTAC
TCCAAGGCTAGGTACGATGAAATTGTAAAGGAAGTTTCTTCGTACCTCAAGAAGGTTGGTTACAACCCTGACAAAATCCCATTTGTCCCCATCTC
TGGTTTTGAAGGAGATAATATGATTGAGAGGTCTACCAACCTCGACTGGTACAAGGGACCAACCCTCCTTGATGCTCTCGACCAGATTAATGAGC
CCAAGAGGCCATCAGACAAGCCACTCCGTCTCCCACTTCAGGATGTTTACAAGATTGGTGGTATTGGAACTGTCCCAGTTGGTCGTGTAGAGACT
GGTGTGATCAAGCCTGGTATGGTTGTGACCTTTGGCCCTACTGGTTTGACAACTGAAGTCAAGTCTGTTGAGATGCACCACGAAGCTCTTCAGGA
GGCGCTCCCTGGTGATAATGTTGGGTTCAATGTTAAGAATGTTGCTGTTAAGGATCTGAAGCGTGGTTTTGTTGCCTCAAACTCCAAGGATGACC
CAGCTAAGGGTGCAGCCAGTTTCACTGCCCAGGTCATCATCATGAACCATCCTGGCCAGATTGGAAATGGATATGCACCAGTGCTCGACTGCCAC
ACTTCCCACATTGCTGTCAAGTTTGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E459565] SGN-U277726 Solanum tuberosum Build 4 467 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T245141 [Download] [View] Facility Assigned ID: PROEF13TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5