EST details — SGN-E460454
| Search information |
| Request: 460454 | Match: SGN-E460454 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C254239 | Clone name: cPRO-31-I6 |
| ||
| Library Name: cPRO | Organism: Solanum tuberosum |
Tissue: roots
Development Stage: in vitro grown stem cuttings
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E460454 | Length: 781 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E460454 [] (trimmed)
GATGCAATACATTATAAAAATCATCATGTGATCAAGCTACTAGAGGAACATGGTGCCAAGCCTCCTATGGCTCCCATGCATGTCAACAATTCACG
TGAAGTTCCAGAATATGAGATTGATGCTAAAGAACTTGATTTCACGAACAGCATTGAATTGGCCAAGGGAACCTTTCATATTGCCTCATGGCGTG
GAATACAAGTTGCTGTGAAAAAGTTTGGAGATGATGAGATTGCTGATGAGGATAAAGTGACGGCATTCAGAGACGAGCTTGCACTTCTCCAGAAG
ATTAGGCATCCAAATGTCGTCCAATTTCTTGGTGCTGTAACACAAAGTAGCCCGATGATGATAGTGACAGAATACTTACCAAAGGGCGATCTCCA
TGCATATTTGAAGAATGAAGAACCTCTTAGACCAACAAAAGCTATCAGATTTGCAATAGACATCGCAAGGGGACTGAACTATCTACATGAAATTA
GACCTGAAGCGATTATTCATCGTGACCTAGAGCCTTCAAATATTTTGAGGGATGATACGGGACACCTGAAAGTTGCTGATTTTGGAGTCAGCAAG
CTATTGAAAGTTACCAACAGGGTCAAAGAAGATAAGCCTCTGACATGTGATAACACATCTTGCCGATATGTAGCTCCAGAGGTTTTCAAAAATGA
GGAATACGATACCAAAGTTGATGTCTTTTCCCTTTGCTTAATTTTGCAAGAGATGATTGAAGGCTGCCCCCCCTTTCAAGCAAGATGANNATGAG
TACCTAACACTATGCTGCTAA
TGAAGTTCCAGAATATGAGATTGATGCTAAAGAACTTGATTTCACGAACAGCATTGAATTGGCCAAGGGAACCTTTCATATTGCCTCATGGCGTG
GAATACAAGTTGCTGTGAAAAAGTTTGGAGATGATGAGATTGCTGATGAGGATAAAGTGACGGCATTCAGAGACGAGCTTGCACTTCTCCAGAAG
ATTAGGCATCCAAATGTCGTCCAATTTCTTGGTGCTGTAACACAAAGTAGCCCGATGATGATAGTGACAGAATACTTACCAAAGGGCGATCTCCA
TGCATATTTGAAGAATGAAGAACCTCTTAGACCAACAAAAGCTATCAGATTTGCAATAGACATCGCAAGGGGACTGAACTATCTACATGAAATTA
GACCTGAAGCGATTATTCATCGTGACCTAGAGCCTTCAAATATTTTGAGGGATGATACGGGACACCTGAAAGTTGCTGATTTTGGAGTCAGCAAG
CTATTGAAAGTTACCAACAGGGTCAAAGAAGATAAGCCTCTGACATGTGATAACACATCTTGCCGATATGTAGCTCCAGAGGTTTTCAAAAATGA
GGAATACGATACCAAAGTTGATGTCTTTTCCCTTTGCTTAATTTTGCAAGAGATGATTGAAGGCTGCCCCCCCTTTCAAGCAAGATGANNATGAG
TACCTAACACTATGCTGCTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E460454] | SGN-U286132 | Solanum tuberosum | Build 4 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T246030 [Download] [View] | Facility Assigned ID: PROER51TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0128 | Quality Trim Threshold: 14.5 |
Working
