EST details — SGN-E460858
Search information |
Request: 460858 | Match: SGN-E460858 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C254883 | Clone name: cPRO-33-J3 |
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Library Name: cPRO | Organism: Solanum tuberosum |
Tissue: roots
Development Stage: in vitro grown stem cuttings
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E460858 | Length: 744 bp (831 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E460858 [] (trimmed)
TGGTTGTAAGGTCCTTGTGAACTACGCCAGATCTTCAAAGGAGGCAGAAGAAGTTTCCAAAGAGATTGAAGCATGTGGTGGTGAAGCCTTGGCTT
TTGGAGGCGACGTTTCGAAAGAAGAAGATGTAGAGTCCATGATGAAAACTGTGGTTGATCGATGGGGAACAGTAGATATCTTGATCAATAATGCA
GGTATCACGCGTGATACCTTGTTGATGAGAATGAAGAAGTCTCAGTGGCAGGAGGTTATTGATTTGAATCTTACAGGAGTTTTTCTCTCCACACA
GGCTGCAGCTAAAATCATGATGAAAAAGAAAAAGGGAAGAATCATCAACATATCTTCTGTTGTTGGCTTAGTTGGCAATGCCGGGCAAGCCAACT
ATAGTGCTGCTAAAGCAGGAGTCATTGGCTTAACCAAGAGTGTTGCAAAAGAATATGCCAGCAGGAATATTACTGTTAATGCTATTGCCCCTGGA
TTTATTGCATCTGATATGACTGCCAAGCTAAGTGAAGACATTGAAAAGAAACTTTTGCAAAGTATTCCGTTAGGACGCTATGGTCAACCTGAAGA
TGTTGCTGGACTAGTGGAATTCCTGGCACTCAGTCCCGCAGCCAGCTATATTACTGGACAGGTTTTGACCATCGATGGTGGGATGGTTATGTAGA
AGTTTACCCCATACTTAGTTTGCTCATGAAGAANGGATTGAAGGGTGATCGCTTATGTTATACCATGACTGAAGCCTCT
TTGGAGGCGACGTTTCGAAAGAAGAAGATGTAGAGTCCATGATGAAAACTGTGGTTGATCGATGGGGAACAGTAGATATCTTGATCAATAATGCA
GGTATCACGCGTGATACCTTGTTGATGAGAATGAAGAAGTCTCAGTGGCAGGAGGTTATTGATTTGAATCTTACAGGAGTTTTTCTCTCCACACA
GGCTGCAGCTAAAATCATGATGAAAAAGAAAAAGGGAAGAATCATCAACATATCTTCTGTTGTTGGCTTAGTTGGCAATGCCGGGCAAGCCAACT
ATAGTGCTGCTAAAGCAGGAGTCATTGGCTTAACCAAGAGTGTTGCAAAAGAATATGCCAGCAGGAATATTACTGTTAATGCTATTGCCCCTGGA
TTTATTGCATCTGATATGACTGCCAAGCTAAGTGAAGACATTGAAAAGAAACTTTTGCAAAGTATTCCGTTAGGACGCTATGGTCAACCTGAAGA
TGTTGCTGGACTAGTGGAATTCCTGGCACTCAGTCCCGCAGCCAGCTATATTACTGGACAGGTTTTGACCATCGATGGTGGGATGGTTATGTAGA
AGTTTACCCCATACTTAGTTTGCTCATGAAGAANGGATTGAAGGGTGATCGCTTATGTTATACCATGACTGAAGCCTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E460858] | SGN-U269911 | Solanum tuberosum | Build 4 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T246434 [Download] [View] | Facility Assigned ID: PROFA50TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.978 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |