EST details — SGN-E462840
Search information |
Request: 462840 | Match: SGN-E462840 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C247813 | Clone name: cPRO-12-J10 |
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Library Name: cPRO | Organism: Solanum tuberosum |
Tissue: roots
Development Stage: in vitro grown stem cuttings
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E462840 | Length: 362 bp (922 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E462840 [] (trimmed)
CTCCATCAACCTGGGCGAAGCTCAAAGGTGAAATTTGCTGTTACTCATCATGGAAAGTTTAATGAAAGAGTATGCTGCTTTTGAAGCGAAAGTAA
AGCGAACTATATTCATTGACAGCCTTTCACCTGCAGCTACTGAAGCTGTCGTTAGAGCTTCACTTGATCAATTTGGGAATGTCATTCAGGTCAAG
TTTATCCCAAACTACCTTGAACCAAAGAACGTTGGACTATCTGCATTGGTTGAGCTGGAAAATGCAGACCAGGCGAAAACTATAATCTCCGAGAT
AAGCAGTTCCTCATTTATGATCTGTGGTATGCCAAGGCCTGTCAGGGCACGTGCTGCTGAAGCAGAGATGCTCGATG
AGCGAACTATATTCATTGACAGCCTTTCACCTGCAGCTACTGAAGCTGTCGTTAGAGCTTCACTTGATCAATTTGGGAATGTCATTCAGGTCAAG
TTTATCCCAAACTACCTTGAACCAAAGAACGTTGGACTATCTGCATTGGTTGAGCTGGAAAATGCAGACCAGGCGAAAACTATAATCTCCGAGAT
AAGCAGTTCCTCATTTATGATCTGTGGTATGCCAAGGCCTGTCAGGGCACGTGCTGCTGAAGCAGAGATGCTCGATG
Unigenes |
Current Unigene builds | |||||
[SGN-E462840] | SGN-U271536 | Solanum tuberosum | Build 4 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T248416 [Download] [View] | Facility Assigned ID: PROBV53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |