Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E462987

Search information 
Request: 462987Match: SGN-E462987
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C248022Clone name: cPRO-13-C24
nocartOrdering Not Available
Library Name: cPROOrganism: Solanum tuberosum

Tissue: roots
Development Stage: in vitro grown stem cuttings

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E462987Length: 682 bp (931 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E462987 [] (trimmed) GAGGACTACAACAGATTAAGACCTCTGAGTTACCGTGGGGCCGATGTTTTCATTTTGGCATTCTCTCTCATTAGTAAAGCCAGCTATGAGAATGT
CTCCAAGAAGTGGATTCCTGAGTTGAAGCACTATGCTCCTGGTGTCCCAATTGTACTTGTTGGAACAAAACTTGATCTTCGGGATGACAAGCAAT
TTTTCGTAGACCATCCTGGTGCTGTGCCGATTACTACTGCTCAGGGTGAGGAGCTAAGGAAAACAATAGGTGCACCATCTTACGTTGAATGTAGT
TCAAAAACACAACAGAATGTGAAAGCTGTGTTTGATGCTGCCATTAAGGTCGTCCTCCAGCCTCCCAAGACGAAGAAAAAGAAGGGGAAATCTCA
AAAGGCCTGCTCGATATTGTGATCAACTACAGGTCCAACGATAATGGCTCATCATAATTCCCGTTGTAACATCCCCCCCCCCCTTATATCCCTTT
GTCTCGGAGGAAGTAGAAGGTTCTCATCTGTCCTATTTGGAACTACTAACGATCCCTCAAAAAGTGTTTCAGGTGGCTTGGTTTTTCTGTATAAT
TGTTGTTCACCATGTAGGCCACTCTAGTGTTTCCTTTGTTTTGATTTGATTTATGTATTAACAACTGAATGATCCTCAGTTAGGAAAACAAATTC
TTTTTGGAAAAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E462987] SGN-U271453 Solanum tuberosum Build 4 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T248563 [Download] [View] Facility Assigned ID: PROBX24TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0016 Quality Trim Threshold: 12.5