Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E478306

Search information 
Request: 478306Match: SGN-E478306
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C230916Clone name: cSTD-4-E23
nocartOrdering Not Available
Library Name: cSTDOrganism: Solanum tuberosum

Tissue: dormant tuber
Development Stage: one month post harvest

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E478306Length: 777 bp (980 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E478306 [] (trimmed) TTCCTCTTCAGCTGTGCCGCATATCGCCTAATTTCTCTTCTCTAAGTTTCTTAGTCTCTCAAGATGGGTAAAGAGAAGATTCACATCAGCATTGT
GGTCATTGGCCACGTCGACTCTGGAAAGTCGACTACCACTGGTCACTTGATCTACAAGCTTGGTGGAATTGACAAGCGTGTTATTGAGAGGTTCG
AGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCTGAACGTGAGCGTGGTATCACCATTGAT
ATTGCTTTGTGGAAGTTTGAGACCACTAAGTACTACTGCACTGTGATTGATGCCCCCGGACACAGAGACTTTATCAAGAACATGATCACTGGTAC
CTCCCAGGCTGACTGTGCTGTCCTCATTATTGACTCCACCACTGGTGGTTTTGAAGCTGGTATCTCTAAAGATGGTCAGACCCGTGAACATGCAT
TGCTTGCTTTCACCCTTGGTGTCAAGCAAATGATCTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGCTAGGTATGATGAA
ATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTCGGTTACAACCCTGACAAAATCCCCTTTGTCCCTATCTCTGGTTTTGAAGGAGATAACAT
GATTGAGAGGTCTACCAACCTCGACTGGTACAAGGGACCAACCCTCCTTGACGCTCTTGACCAGATTAATGAGCCCAAGAGGCCATCANGACAAC
CCCTCCGTCTTCCACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E478306] SGN-U277726 Solanum tuberosum Build 4 467 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T223527 [Download] [View] Facility Assigned ID: PTDAM36TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5