EST details — SGN-E478679
| Search information |
| Request: 478679 | Match: SGN-E478679 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C231234 | Clone name: cSTD-6-F5 |
| ||
| Library Name: cSTD | Organism: Solanum tuberosum |
Tissue: dormant tuber
Development Stage: one month post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E478679 | Length: 805 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E478679 [] (trimmed)
AACAATTCAAGGTCAGAGTGCAACAACAGCCTTGACGATGGAGGTGGCAAGGGTCCAAGCAATATCATCAATAACGAAATGCATGGACACAATAC
CATCAGAATATATTCGTTCAGAGAACGAACAACCTGCAGCGACAACGCTGCAGGGAGTGGTACTTGAGGTACCAGTCATCGACATAAGCAATGTC
GATGACGAAGAAAAGTTAGTGAAAGAAATAGTTGAGGCTAGTAAAGAGTGGGGTATTTTTCAAGTGATAAATCATGGGATACCTGATGAAGTGAT
TGAGAATTTGCAAAAAGTTGGAAAAGAGTTTTTTGAGGAAGTGCCACAAAAGGAAAAAGAATTGATTGCAAAGAAGCCAGGGGCACAAAGTTTAG
AAGGATATGGTACTTCTTTGCAGAAGGAAGTTGAAGGGAAAAAAGGTTGGGTTGATCATTTGTTTCATAAGATTTGGCCTCCTTCTGCTATTAAC
TATCGTTATTGGCCAAAAAATCCTCCTTCCTACAGGGAAGCAAATGANGAATACGCAAAGTGGCTGCGCAAAGTTTCTGATGGTATCTTTAGGAG
CTTGTCACTTGGGCTTGGTTTGGAAGGCCATGAAATGATGGAGGCAGCTGGTAGTGAAGACATAGTTTACATGTTAAAGATCAATTATTATCCAC
CATGCCCAAGGGCCTGATTGGCTCTTGGAGGTGTGGCCCATACAGATATGTAATATATCACCCTTCTTGTCCCAAATGAAGTCCAGGACTCCAAG
TGTTTAAGATGGTCATTGGTATGATGTCAACTACATACCAAATGC
CATCAGAATATATTCGTTCAGAGAACGAACAACCTGCAGCGACAACGCTGCAGGGAGTGGTACTTGAGGTACCAGTCATCGACATAAGCAATGTC
GATGACGAAGAAAAGTTAGTGAAAGAAATAGTTGAGGCTAGTAAAGAGTGGGGTATTTTTCAAGTGATAAATCATGGGATACCTGATGAAGTGAT
TGAGAATTTGCAAAAAGTTGGAAAAGAGTTTTTTGAGGAAGTGCCACAAAAGGAAAAAGAATTGATTGCAAAGAAGCCAGGGGCACAAAGTTTAG
AAGGATATGGTACTTCTTTGCAGAAGGAAGTTGAAGGGAAAAAAGGTTGGGTTGATCATTTGTTTCATAAGATTTGGCCTCCTTCTGCTATTAAC
TATCGTTATTGGCCAAAAAATCCTCCTTCCTACAGGGAAGCAAATGANGAATACGCAAAGTGGCTGCGCAAAGTTTCTGATGGTATCTTTAGGAG
CTTGTCACTTGGGCTTGGTTTGGAAGGCCATGAAATGATGGAGGCAGCTGGTAGTGAAGACATAGTTTACATGTTAAAGATCAATTATTATCCAC
CATGCCCAAGGGCCTGATTGGCTCTTGGAGGTGTGGCCCATACAGATATGTAATATATCACCCTTCTTGTCCCAAATGAAGTCCAGGACTCCAAG
TGTTTAAGATGGTCATTGGTATGATGTCAACTACATACCAAATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E478679] | SGN-U275099 | Solanum tuberosum | Build 4 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T223900 [Download] [View] | Facility Assigned ID: PTDAW27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0183 | Quality Trim Threshold: 14.5 |
Working
