EST details — SGN-E480721
Search information |
Request: 480721 | Match: SGN-E480721 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C228638 | Clone name: cSTD-15-E3 |
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Library Name: cSTD | Organism: Solanum tuberosum |
Tissue: dormant tuber
Development Stage: one month post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E480721 | Length: 376 bp (924 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E480721 [] (trimmed)
CAGTTAGTTAAAATTGAAGTTGAAAATCAGCCTAGCATAGCATCAATGGTGTGCTACAAAAGCCATGACACTTGATAATTTGTACTCAATAGTTG
AGATTTTTTTTCCTTCAGTATAAGCAGGAAGAAGCGTGCTGTGCAAGGCAAAGTGTGTTTTTGAGTGAGCTGCGTCTCTACAACCACCCGGGGCC
CCTCTTCCACCTTCTTCCTCATCGGTTAAATCGAATAATCTGCACAATTTTTTTTTGGATCATATCAGTATATAACAGAGTGGAAGAGGCTTTTC
TGTTGTTGAATGGGAATATTATAGGAGTGATGAGGAAGTCTTTTAAAGATTCACTCAAAGCACTTGAAGCTGATATTCAGCATGCTAATAC
AGATTTTTTTTCCTTCAGTATAAGCAGGAAGAAGCGTGCTGTGCAAGGCAAAGTGTGTTTTTGAGTGAGCTGCGTCTCTACAACCACCCGGGGCC
CCTCTTCCACCTTCTTCCTCATCGGTTAAATCGAATAATCTGCACAATTTTTTTTTGGATCATATCAGTATATAACAGAGTGGAAGAGGCTTTTC
TGTTGTTGAATGGGAATATTATAGGAGTGATGAGGAAGTCTTTTAAAGATTCACTCAAAGCACTTGAAGCTGATATTCAGCATGCTAATAC
Unigenes |
Current Unigene builds | |||||
[SGN-E480721] | SGN-U272075 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T225942 [Download] [View] | Facility Assigned ID: PTDCE26TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.962 | Expected Error Rate: 0.0114 | Quality Trim Threshold: 14.5 |