EST details — SGN-E481608
Search information |
Request: 481608 | Match: SGN-E481608 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C229325 | Clone name: cSTD-18-F6 |
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Library Name: cSTD | Organism: Solanum tuberosum |
Tissue: dormant tuber
Development Stage: one month post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E481608 | Length: 485 bp (936 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E481608 [] (trimmed)
GAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTGGTGCAATCAATTACATATCAATATTTGCTGGTAATGACCCAGAAAACTGTACATATGT
GAATGTTTGAAAAAAATCATATACAAACAGAATGCCTGGTATGTACTACCTACCTAACCTAAGTAATCTTTATCAATAATTAGGATGATAAGAGA
CAAGTGCTGGATCTGGATAGACGACAGGCAATTTATCGATGTACATGAGAAGCCTCTTCATATTTTCCCTCGTTATTGTCGACAAGTCTTTGATG
TCACATATGTTGGTGTATATCCAAAGCTCTCCGGAATCCACCCTTTTGAGACTATCTCGACAGAAAGGGCATGACTGAGATCGGGCACGCCAATT
TCTATAACACTTCATGCATAAAGAGTGATTGCAGGAGGGCAAGACAACCTTTGTATCCATCTCCATGCAGATACCACATTCCTCCTCCCTCTCTA
TTTCGATTTC
GAATGTTTGAAAAAAATCATATACAAACAGAATGCCTGGTATGTACTACCTACCTAACCTAAGTAATCTTTATCAATAATTAGGATGATAAGAGA
CAAGTGCTGGATCTGGATAGACGACAGGCAATTTATCGATGTACATGAGAAGCCTCTTCATATTTTCCCTCGTTATTGTCGACAAGTCTTTGATG
TCACATATGTTGGTGTATATCCAAAGCTCTCCGGAATCCACCCTTTTGAGACTATCTCGACAGAAAGGGCATGACTGAGATCGGGCACGCCAATT
TCTATAACACTTCATGCATAAAGAGTGATTGCAGGAGGGCAAGACAACCTTTGTATCCATCTCCATGCAGATACCACATTCCTCCTCCCTCTCTA
TTTCGATTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E481608] | SGN-U272075 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T226829 [Download] [View] | Facility Assigned ID: PTDCT27TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.960 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |