EST details — SGN-E482085
| Search information |
| Request: 482085 | Match: SGN-E482085 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C230028 | Clone name: cSTD-20-F20 |
| ||
| Library Name: cSTD | Organism: Solanum tuberosum |
Tissue: dormant tuber
Development Stage: one month post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E482085 | Length: 764 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E482085 [] (trimmed)
AATGCCCGATAGAAGGATCCTAACATGGGAGGAAAGGAAAAAAATAGCCAGAGGAGCAGCCAAAGGACTCTGCTTCCTTCACCACAACTGCATCC
CACACATCATACACCGCGACATGAAGTCAAGCAACGTGCTATTAGACAACGAAATGGACGCCAGGGTGTCTGATTTTGGTATGGCAAGGCTGATA
AGCGCGCTGGACACACACCTCAGTGTGTCCACACTAGCAGGAACACCAGGATATGTACCACCTGAGTACTATCAGAGTTTTAGGTGCACAGCAAA
GGGAGACGTGTACTCGTTTGGAGTCGTGCTTCTTGAACTCTTGACAGGTAAAAGGCCAACAGATAAGGAAGATTTTGGTGACACAAACTTGGTTG
GATGGGTGAAAATGAAAGTAAGAGAAGGGAAATCAATGGAAGTAATTGATCAAGAATTGTTATCAGTGACTAAAGGAAATGATGAAGCAGAAGTT
TTAGAAGTTAAAGAGATGGTAAGGTACTTAGAGATAACAATGCAATGTGTAGAGGATTTTGCATCAAAAAGGCCTAATATGTTACAAGTTGTGGC
TATGTTGAGAGAACTTATGCCTGGAAGTAGTTCAAGCAACAGTGGCTAAACAGCAAACCAGAAACAAAAAAAAGGAAAAAAAAAACAAAAGAATG
TAAAATTCTTTCCTTGTTTTGTTTGTGCAAGTATTCATCTGCATTTGTATTTAGTCAACAACTTCTCTTATTTTTTTGCAATATTATTCCCATGT
TTTA
CACACATCATACACCGCGACATGAAGTCAAGCAACGTGCTATTAGACAACGAAATGGACGCCAGGGTGTCTGATTTTGGTATGGCAAGGCTGATA
AGCGCGCTGGACACACACCTCAGTGTGTCCACACTAGCAGGAACACCAGGATATGTACCACCTGAGTACTATCAGAGTTTTAGGTGCACAGCAAA
GGGAGACGTGTACTCGTTTGGAGTCGTGCTTCTTGAACTCTTGACAGGTAAAAGGCCAACAGATAAGGAAGATTTTGGTGACACAAACTTGGTTG
GATGGGTGAAAATGAAAGTAAGAGAAGGGAAATCAATGGAAGTAATTGATCAAGAATTGTTATCAGTGACTAAAGGAAATGATGAAGCAGAAGTT
TTAGAAGTTAAAGAGATGGTAAGGTACTTAGAGATAACAATGCAATGTGTAGAGGATTTTGCATCAAAAAGGCCTAATATGTTACAAGTTGTGGC
TATGTTGAGAGAACTTATGCCTGGAAGTAGTTCAAGCAACAGTGGCTAAACAGCAAACCAGAAACAAAAAAAAGGAAAAAAAAAACAAAAGAATG
TAAAATTCTTTCCTTGTTTTGTTTGTGCAAGTATTCATCTGCATTTGTATTTAGTCAACAACTTCTCTTATTTTTTTGCAATATTATTCCCATGT
TTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E482085] | SGN-U282422 | Solanum tuberosum | Build 4 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T227306 [Download] [View] | Facility Assigned ID: PTDDB34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 14.5 |
Working
