EST details — SGN-E482085
Search information |
Request: 482085 | Match: SGN-E482085 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C230028 | Clone name: cSTD-20-F20 |
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Library Name: cSTD | Organism: Solanum tuberosum |
Tissue: dormant tuber
Development Stage: one month post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E482085 | Length: 764 bp (916 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E482085 [] (trimmed)
AATGCCCGATAGAAGGATCCTAACATGGGAGGAAAGGAAAAAAATAGCCAGAGGAGCAGCCAAAGGACTCTGCTTCCTTCACCACAACTGCATCC
CACACATCATACACCGCGACATGAAGTCAAGCAACGTGCTATTAGACAACGAAATGGACGCCAGGGTGTCTGATTTTGGTATGGCAAGGCTGATA
AGCGCGCTGGACACACACCTCAGTGTGTCCACACTAGCAGGAACACCAGGATATGTACCACCTGAGTACTATCAGAGTTTTAGGTGCACAGCAAA
GGGAGACGTGTACTCGTTTGGAGTCGTGCTTCTTGAACTCTTGACAGGTAAAAGGCCAACAGATAAGGAAGATTTTGGTGACACAAACTTGGTTG
GATGGGTGAAAATGAAAGTAAGAGAAGGGAAATCAATGGAAGTAATTGATCAAGAATTGTTATCAGTGACTAAAGGAAATGATGAAGCAGAAGTT
TTAGAAGTTAAAGAGATGGTAAGGTACTTAGAGATAACAATGCAATGTGTAGAGGATTTTGCATCAAAAAGGCCTAATATGTTACAAGTTGTGGC
TATGTTGAGAGAACTTATGCCTGGAAGTAGTTCAAGCAACAGTGGCTAAACAGCAAACCAGAAACAAAAAAAAGGAAAAAAAAAACAAAAGAATG
TAAAATTCTTTCCTTGTTTTGTTTGTGCAAGTATTCATCTGCATTTGTATTTAGTCAACAACTTCTCTTATTTTTTTGCAATATTATTCCCATGT
TTTA
CACACATCATACACCGCGACATGAAGTCAAGCAACGTGCTATTAGACAACGAAATGGACGCCAGGGTGTCTGATTTTGGTATGGCAAGGCTGATA
AGCGCGCTGGACACACACCTCAGTGTGTCCACACTAGCAGGAACACCAGGATATGTACCACCTGAGTACTATCAGAGTTTTAGGTGCACAGCAAA
GGGAGACGTGTACTCGTTTGGAGTCGTGCTTCTTGAACTCTTGACAGGTAAAAGGCCAACAGATAAGGAAGATTTTGGTGACACAAACTTGGTTG
GATGGGTGAAAATGAAAGTAAGAGAAGGGAAATCAATGGAAGTAATTGATCAAGAATTGTTATCAGTGACTAAAGGAAATGATGAAGCAGAAGTT
TTAGAAGTTAAAGAGATGGTAAGGTACTTAGAGATAACAATGCAATGTGTAGAGGATTTTGCATCAAAAAGGCCTAATATGTTACAAGTTGTGGC
TATGTTGAGAGAACTTATGCCTGGAAGTAGTTCAAGCAACAGTGGCTAAACAGCAAACCAGAAACAAAAAAAAGGAAAAAAAAAACAAAAGAATG
TAAAATTCTTTCCTTGTTTTGTTTGTGCAAGTATTCATCTGCATTTGTATTTAGTCAACAACTTCTCTTATTTTTTTGCAATATTATTCCCATGT
TTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E482085] | SGN-U282422 | Solanum tuberosum | Build 4 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T227306 [Download] [View] | Facility Assigned ID: PTDDB34TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.959 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 14.5 |