EST details — SGN-E537513

Search information 
Request: 537513Match: SGN-E537513
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C188805Clone name: TUS-56-C11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C48257 [cLEI-3-O22] Trace: SGN-T79934 EST: SGN-E266246 Direction: 5' Facility: TIGR
Clone: SGN-C188805 [TUS-56-C11] Trace: SGN-T338386 EST: SGN-E537511 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E537513Length: 692 bp (897 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E537513 [] (trimmed) GTAAAATAACAACTGTTACAACGTACTATATATATTATATGGGACTCTTGCCCACATTGTTTAAGCACAAAGAATAAATGCACCGCCTAGCATGA
ACAGAGCAAAACTAATGTATTACACTAACTAATCCACACATACAATACAAGTTTTAGGAATTAAAACCACCCCTCATATCACACACTTCCTAAAG
CCAACATCTGATAATACACGACACTGAATGACCACATACCATACACCTCCAAGAACCACTAATCTATTCAATCCAGTTTTCATACTATCTGTTAA
TCACAACTTTTTTGATCTGTTGGTCTGCTACTCCCACCTGTTCGATTAGCTTCTCCCACTCTTGATGCCAAAGCAAGAACTTCAGGTGACATCTC
CCAGCTTCCACTTTTCCTTCCCCAGCTTGATCCTCTAGGATGTATTCCTGCACGATCACTCTCATCTACTGTACTTCTTATCTCAGGAGACATTT
GCCCTAACATGCCATCTTTAATGTTCAGGCCATCATTGTCGCTAAGTTGTCCTTCGTTATCCCCTACTTCACTCCAAACCGCTTTCCTGCCCATT
TCTATGTCCTCCACAGCCTTCCCCATGTTTGGACTCACAAAACCCCCACCTGCAGATCGAGTTGCCACCTTGGGTTCCCTGGGCACCTTTGCACG
GAAATTTGTCTTGGATGGGAGAATACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E537513] SGN-U566382 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338388 [Download][View] Facility Assigned ID: TUS56C11_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5