EST details — SGN-E537541

Search information 
Request: 537541Match: SGN-E537541
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C188821Clone name: TUS-56-D3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C48390 [cLEI-4-G19] Trace: SGN-T80316 EST: SGN-E267169 Direction: 5' Facility: TIGR
Clone: SGN-C188821 [TUS-56-D3] Trace: SGN-T338413 EST: SGN-E537538 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E537541Length: 674 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E537541 [] (trimmed) TTGATTGAAAAAAAGAAGAAGAAGTATGGCTGATCAATACGAACAGAACAAGGCATCCGTTGAAGAGACTGTTGGTACCAACGTGGAAGCTACTG
ATCGTGGTTTGTTTGATTTCATTGGAAAAAAAGAAGAGGAAAAACCAAGTCATGCTCATGAAGAAGAGGCAATTTCATCTGAGTTGTCTGAAAAA
GTTAACGTAAGTGAAGAAGTGGAACCCAAGGAGGAGGAAAAGAAACTTCATCGATCAAATAGCAGCTCTAGTAGCTCCAGTGATGAGGAGGAAGA
AATTGGAGAGGATGGACAGAAGATCAAGAAGAAGAAAAAGAAGGGATTGAAGGATAAGATTAAGGAAAAAATATCTGGTGATCACAAGGAAGAAT
CGAAAGCAGAGGATACCTCAGTTCCAGTTGAGAAATACGAGGAAACAGAGGAGAAAAAAGGATTTCTAGACAAAATTAAGGAGAAATTGCCAGGT
GGCGGGCATAAGAAGACGGAGGAAGTGGCGGCGCCACCACCACCACCACCGGCTGCGGTGGAGCATGAGGCGGAGGGGAAGGAGAAGAAGGGATT
TTTGGACAAATTAAGGAGAAATTACAGGATACCACTCAAGGCTGAAGAGGAAAGGAGAAGGAAAAGACTAAATGAATGAAAGTTTTTTTTATTTT
ACTTTTGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E537541] SGN-U581375 Tomato 200607 Build 2 231 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338416 [Download][View] Facility Assigned ID: TUS56D03_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.929 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5