EST details — SGN-E537651
| Search information |
| Request: 537651 | Match: SGN-E537651 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188887 | Clone name: TUS-56-F21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C48780 [cLEI-5-N12] | Trace: SGN-T80566 | EST: SGN-E266594 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188887 [TUS-56-F21] | Trace: SGN-T338528 | EST: SGN-E537653 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537651 | Length: 758 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E537651 [] (trimmed)
CGGATGATATTTGTGTTATAATCCAAATCAAAACCACAAAACCGTTCCAACAGTATTCATACTCTCTTTCAATTGAGACTCTACGAATTCGCTTA
TCTGCAAGCGATTTTCACAAGAGAGCTTAACAAACATAAACAGCATTGATCGTATTCCTTTTTCGGACCCAAAGTGTTGGGGAGCACTGTGACCT
TTGATTTTTGGGTCTTGGTGGTTGTTGAAAGGTAGATTAGATAAATGATCTACCGATGACCTTAGGGGACGGGGAATGAGATTTCACAAAATCTA
AGCTTGGACACCAGGGCCTCACAAGTTATAGTTATCTAGTCCTAGATCCCTAAGAGCATCAGTTGCAGCATTCTTACAGCTCTTGTAATTCATCT
TAGCCTTTCTTATTAGCTTCTCAATGCCATTACCAAGCAAAATAGTTCTGTTTTCTGGATTCCTAACCACAAGATTTCGGATCATGAAACAACAG
CTTCTTTGCAGTAGCTCTGATTCTGGAAACCTCTGCATAGCTTGGATAACAATATCACCAGCTCCGGCTTCAATAGCACACGCAGCATTATGTGG
AGACCTCAAGGACAGTACAGTTATCATAGACATGACCTCATGTAGAACAGCCGGATCATTGGAAAATCTCGTTGCAAGTTTCATAAGCTTGTTCA
TGCCATCCTTATCTACAATAGCACTCTTGTTTATGTCACTTCTTGCCAACTTAGATAATAAAGAGCAGCAAGTTATGGCTACAACTTTTTCAC
TCTGCAAGCGATTTTCACAAGAGAGCTTAACAAACATAAACAGCATTGATCGTATTCCTTTTTCGGACCCAAAGTGTTGGGGAGCACTGTGACCT
TTGATTTTTGGGTCTTGGTGGTTGTTGAAAGGTAGATTAGATAAATGATCTACCGATGACCTTAGGGGACGGGGAATGAGATTTCACAAAATCTA
AGCTTGGACACCAGGGCCTCACAAGTTATAGTTATCTAGTCCTAGATCCCTAAGAGCATCAGTTGCAGCATTCTTACAGCTCTTGTAATTCATCT
TAGCCTTTCTTATTAGCTTCTCAATGCCATTACCAAGCAAAATAGTTCTGTTTTCTGGATTCCTAACCACAAGATTTCGGATCATGAAACAACAG
CTTCTTTGCAGTAGCTCTGATTCTGGAAACCTCTGCATAGCTTGGATAACAATATCACCAGCTCCGGCTTCAATAGCACACGCAGCATTATGTGG
AGACCTCAAGGACAGTACAGTTATCATAGACATGACCTCATGTAGAACAGCCGGATCATTGGAAAATCTCGTTGCAAGTTTCATAAGCTTGTTCA
TGCCATCCTTATCTACAATAGCACTCTTGTTTATGTCACTTCTTGCCAACTTAGATAATAAAGAGCAGCAAGTTATGGCTACAACTTTTTCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537651] | SGN-U575465 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338526 [Download][View] | Facility Assigned ID: TUS56F21_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 20.5 |
Working
