EST details — SGN-E537812
| Search information |
| Request: 537812 | Match: SGN-E537812 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188981 | Clone name: TUS-56-J19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C49497 [cLEI-8-H18] | Trace: SGN-T81507 | EST: SGN-E267635 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188981 [TUS-56-J19] | Trace: SGN-T338690 | EST: SGN-E537815 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537812 | Length: 748 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E537812 [] (trimmed)
ATAGTTCCTCCTACAGCAGCAGCTATGATGGCCGGCTCAGCCACTCCCTTCCCGTCGACCTCCGTATATCTCGCCGCTGGCGAACTGTCCTTATC
AATCCCAGTACCTAAACCAACAAATTTCGCCGGCCGTTCATCCACTTTCCGCCGCAACTCCATCCTCCATTCCATCCGGGTCGAGAATCCAAATT
CGGGTCGGGTCAATACTATCGTGTGCAAAGCTAACCGGTCCGCATACTCGCCACTGAACTCCGGGTCGAACTACGGCGACCGTCCACCGACTGAG
ATGGCTCCGCTTTTCCCCGGGTGTGATTACGAACACTGGCTTATAGTTATGGATAAGCCCGGAGGTGAAGGTGCTACTAAACAGCAGATGATTGA
TTGTTACATACAAACATTGGCTAAAGTAGTTGGGAGTGAAGAAGAGGCCAAGAAGAAGATATACAATGTTTCATGCGAAAGATACTTCGGTTTTG
GATGTGAGATTGATGAGGAGACATCGAATAAGCTTGAAGGTTTGCCTGGTGTTCTCTTTGTCCTACCAGATTCATATGTCGATCCTGAGAACAAG
GATTATGGAGCTGAGCTATTTGTGAACGGAGAGATAGTTCACAGATCACCTGAAAGACAAAAGAGAGTGGAGCCAGTACCCCAGAGAGCTCAAGA
CAGACCCAGATATAACGACCGAACACGTTATGGGAGACGCCGTGAGAACACACGGTGAAGATAGTATTGCAACAACTATGCCT
AATCCCAGTACCTAAACCAACAAATTTCGCCGGCCGTTCATCCACTTTCCGCCGCAACTCCATCCTCCATTCCATCCGGGTCGAGAATCCAAATT
CGGGTCGGGTCAATACTATCGTGTGCAAAGCTAACCGGTCCGCATACTCGCCACTGAACTCCGGGTCGAACTACGGCGACCGTCCACCGACTGAG
ATGGCTCCGCTTTTCCCCGGGTGTGATTACGAACACTGGCTTATAGTTATGGATAAGCCCGGAGGTGAAGGTGCTACTAAACAGCAGATGATTGA
TTGTTACATACAAACATTGGCTAAAGTAGTTGGGAGTGAAGAAGAGGCCAAGAAGAAGATATACAATGTTTCATGCGAAAGATACTTCGGTTTTG
GATGTGAGATTGATGAGGAGACATCGAATAAGCTTGAAGGTTTGCCTGGTGTTCTCTTTGTCCTACCAGATTCATATGTCGATCCTGAGAACAAG
GATTATGGAGCTGAGCTATTTGTGAACGGAGAGATAGTTCACAGATCACCTGAAAGACAAAAGAGAGTGGAGCCAGTACCCCAGAGAGCTCAAGA
CAGACCCAGATATAACGACCGAACACGTTATGGGAGACGCCGTGAGAACACACGGTGAAGATAGTATTGCAACAACTATGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537812] | SGN-U576315 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338687 [Download][View] | Facility Assigned ID: TUS56J19_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.991 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 20.5 |
Working
