EST details — SGN-E537899

Search information 
Request: 537899Match: SGN-E537899
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189030Clone name: TUS-56-L20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C49887 [cLEI-9-P5] Trace: SGN-T81619 EST: SGN-E265338 Direction: 5' Facility: TIGR
Clone: SGN-C189030 [TUS-56-L20] Trace: SGN-T348842 EST: SGN-E547967 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E537899Length: 219 bp (823 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E537899 [] (trimmed) GCAGCTCAGTGTTTGCAGAAATTGCCCTCTTCAAATAATAAGTTCACTTATAATTGTGATCATCATACTTTTAACTTCCTTGTTCAAGATGGTTA
TGCTTATTGTGTAGTTTCCAAAGAATCTGTGGGCAAGCAAATTTCTATTGCATTTTTGGAACGTGTGAGAGCTGATTTTAATAAAAGATATGGTG
GTGGTAAAGCAGATACCGCTGTGGCTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E537899] SGN-U574473 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338774 [Download][View] Facility Assigned ID: TUS56L20_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.921 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5