EST details — SGN-E537907
| Search information |
| Request: 537907 | Match: SGN-E537907 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189036 | Clone name: TUS-56-M2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C45995 [cLEI-10-H13] | Trace: SGN-T81828 | EST: SGN-E264989 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189036 [TUS-56-M2] | Trace: SGN-T338784 | EST: SGN-E537909 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537907 | Length: 523 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E537907 [] (trimmed)
CAGTGAAGCAATGCCAGGTTAAATTAATAATACTAGGACCCTCCAAAGATTATCTTTTACATAAATTTATCATATACTAACTTATTACAAAGGTC
TAAGAGAGATGCAGAAATGGGAAAACGATAACTCTACTAGATTAGGGACCTGTGCCACCATTATGTACATTTGCCTTCACACAAACTGAATATGC
TCGGTTTTGACAGTAAAGTGACCATTGAGAAGTTATATGTCTTGCTTAGGCTTCCGACTTAATTCAAAATACTGACCACCCATCAGCTGTAATAT
TTCTACCCACAAACTCTCTGATGACCAAATTTGCGAACCTGCAAAAATCACATTTGCACTACAAGAGGCAACATACCAATAGCCAGATTCAATCT
CTTCCCTCAAGTGGTCAAGCTGCCACCCCGCATAGCCAACAAAGAATCTGAAATCATGAGATTTAAGCACCCCTTTGTTTACCAATGCAGATGCT
TGTTCCAAACTGTTCCGAGCTCCAAAACACACTCCAGGAATCACCTCT
TAAGAGAGATGCAGAAATGGGAAAACGATAACTCTACTAGATTAGGGACCTGTGCCACCATTATGTACATTTGCCTTCACACAAACTGAATATGC
TCGGTTTTGACAGTAAAGTGACCATTGAGAAGTTATATGTCTTGCTTAGGCTTCCGACTTAATTCAAAATACTGACCACCCATCAGCTGTAATAT
TTCTACCCACAAACTCTCTGATGACCAAATTTGCGAACCTGCAAAAATCACATTTGCACTACAAGAGGCAACATACCAATAGCCAGATTCAATCT
CTTCCCTCAAGTGGTCAAGCTGCCACCCCGCATAGCCAACAAAGAATCTGAAATCATGAGATTTAAGCACCCCTTTGTTTACCAATGCAGATGCT
TGTTCCAAACTGTTCCGAGCTCCAAAACACACTCCAGGAATCACCTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537907] | SGN-U580758 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338782 [Download][View] | Facility Assigned ID: TUS56M02_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 14.5 |
Working
