EST details — SGN-E537966
| Search information |
| Request: 537966 | Match: SGN-E537966 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189069 | Clone name: TUS-56-N11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46196 [cLEI-11-K1] | Trace: SGN-T81868 | EST: SGN-E265713 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E537966 | Length: 816 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E537966 [] (trimmed)
CAAATTCCACACTTGCCATCTTATGAGAGTTTGTGTATTCCTAATTTCCTTGCTCCTCAAAGTGTTGAAAATTTTGCTAATATATTTTGGCCTCA
TGGTAATCCTGAATTCTGCAATTTGGTCAAATCTTATGCAAATTCACTTCTGAAATTGGATGAAATGATAAAAAGGATGATTTTGGAGAATTTGG
GATTAGAAAAGCACATTAATGAATTATTGGATAATTTTGTCCTATTTAGATTTACCCATTACAAGGGAACATTATCTATTAATAAAGATGAAAAT
GATAAATACGATGGATTGGGTGCCCATACAGATAATAACTTCTTGACTTTTATAGCACAAAATCAAGTCAATGGATTGCAAATCAACAAAAATGG
AGAGTGGATTAATGCCACTATTTCACCAAATTCTTTTGTTGTTCTGTCTGGTGATTCCTTTAAAGCATGGACAAATGGTCGATTGCATTCTCCCC
TCCATAGGGTAGCAATGCCTAGAGAAAATGATAGACTCTCCCTTCAATTTAATACATTATCAAAACCAGGTCATTTCATAGAGGCCCCAAAAGAA
CTAGTGGATGAAAAACACCCTTTACTCTTCAAGCCATATGAAATGCATGGATTATTTAACTATGTTGCTTCAAACCCTGGCACTCCTAATGCTTT
CCAGGCTTATTGTGGTGTTTGATATTATAAAGTCAATTTTTTGATGAACATTTTTATCGGAGTATCGCTAGCATATATGGAATTTCTGATAAAGA
TTCGTCGAAGATGTCTTGAACAGCCATCATTTCGTTTGGAATTTGTGTTTTTTTTC
TGGTAATCCTGAATTCTGCAATTTGGTCAAATCTTATGCAAATTCACTTCTGAAATTGGATGAAATGATAAAAAGGATGATTTTGGAGAATTTGG
GATTAGAAAAGCACATTAATGAATTATTGGATAATTTTGTCCTATTTAGATTTACCCATTACAAGGGAACATTATCTATTAATAAAGATGAAAAT
GATAAATACGATGGATTGGGTGCCCATACAGATAATAACTTCTTGACTTTTATAGCACAAAATCAAGTCAATGGATTGCAAATCAACAAAAATGG
AGAGTGGATTAATGCCACTATTTCACCAAATTCTTTTGTTGTTCTGTCTGGTGATTCCTTTAAAGCATGGACAAATGGTCGATTGCATTCTCCCC
TCCATAGGGTAGCAATGCCTAGAGAAAATGATAGACTCTCCCTTCAATTTAATACATTATCAAAACCAGGTCATTTCATAGAGGCCCCAAAAGAA
CTAGTGGATGAAAAACACCCTTTACTCTTCAAGCCATATGAAATGCATGGATTATTTAACTATGTTGCTTCAAACCCTGGCACTCCTAATGCTTT
CCAGGCTTATTGTGGTGTTTGATATTATAAAGTCAATTTTTTGATGAACATTTTTATCGGAGTATCGCTAGCATATATGGAATTTCTGATAAAGA
TTCGTCGAAGATGTCTTGAACAGCCATCATTTCGTTTGGAATTTGTGTTTTTTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537966] | SGN-U580412 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338841 [Download][View] | Facility Assigned ID: TUS56N11_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 14.5 |
Working
