EST details — SGN-E537985
| Search information |
| Request: 537985 | Match: SGN-E537985 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189080 | Clone name: TUS-56-N22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46292 [cLEI-12-B17] | Trace: SGN-T82294 | EST: SGN-E267875 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189080 [TUS-56-N22] | Trace: SGN-T338857 | EST: SGN-E537982 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537985 | Length: 785 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E537985 [] (trimmed)
TTTTTTTCACTCAGAAATCAAAATATCTGAAATTTCACTAGTTAAAAGTTTTAAAAGAAAACATTGCGTACTTGTCCTATACGATTATACCAATC
CCCCACAATTGAAAAGAAGAAGAAAAAACCCCGAATCTCCAATTATAGTAACACTCCACATTGGCCTATTGGGCCAAACAAACAAGACCAATTGA
ATTGTCACCACCACTTCCGGGCAACTTCCTCTTGGGCTTGGCCTCTTGTAACATGGACACAACATCCCTCATCGAAGGCCGGTCAGCCGGGTTCC
GGCTAGTACATAGCAACGCCACCCTAAGCATCAACATCATTTCCTCCCTCACTCGAGGACACGAAGCACCGATATTTTTATCCAAAATATCAGTT
ACACCGTTTTTAATCTTCATCTTGGACCTCACCCAATCCACAATGCTATTTCCATCGCCAAATTCCGAATCTACCGATCTTTTTCCCGATAAAAT
TTCCATTAACACCACTCCATAGCTATAAATGTCACTCTTTTCGTCCACTTGCAATGTATACGCGTATTCGGGTGCAATGTAGCCATAAGATCCAG
CAATGACGGACATCGATTCGTCGCATTCAATCAATTTAGCAACCCCAAAATCAGCAACCCTAGCTTCCATTTCACCATCAAGAAGAATGTTGCTA
GGTTTTAGGTCACGATGAACAATGACAGGGTCACAATCATGATGAAGATAACAAATCCCTTGTGCAACACCAAGTGCAATTTTGTACCTAGTNAA
CCAATCACCCAACAAATTGCATCTT
CCCCACAATTGAAAAGAAGAAGAAAAAACCCCGAATCTCCAATTATAGTAACACTCCACATTGGCCTATTGGGCCAAACAAACAAGACCAATTGA
ATTGTCACCACCACTTCCGGGCAACTTCCTCTTGGGCTTGGCCTCTTGTAACATGGACACAACATCCCTCATCGAAGGCCGGTCAGCCGGGTTCC
GGCTAGTACATAGCAACGCCACCCTAAGCATCAACATCATTTCCTCCCTCACTCGAGGACACGAAGCACCGATATTTTTATCCAAAATATCAGTT
ACACCGTTTTTAATCTTCATCTTGGACCTCACCCAATCCACAATGCTATTTCCATCGCCAAATTCCGAATCTACCGATCTTTTTCCCGATAAAAT
TTCCATTAACACCACTCCATAGCTATAAATGTCACTCTTTTCGTCCACTTGCAATGTATACGCGTATTCGGGTGCAATGTAGCCATAAGATCCAG
CAATGACGGACATCGATTCGTCGCATTCAATCAATTTAGCAACCCCAAAATCAGCAACCCTAGCTTCCATTTCACCATCAAGAAGAATGTTGCTA
GGTTTTAGGTCACGATGAACAATGACAGGGTCACAATCATGATGAAGATAACAAATCCCTTGTGCAACACCAAGTGCAATTTTGTACCTAGTNAA
CCAATCACCCAACAAATTGCATCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537985] | SGN-U568415 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338860 [Download][View] | Facility Assigned ID: TUS56N22_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |
Working
