EST details — SGN-E538061

Search information 
Request: 538061Match: SGN-E538061
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189126Clone name: TUS-56-P20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46772 [cLEI-13-K15] Trace: SGN-T82560 EST: SGN-E268499 Direction: 5' Facility: TIGR
Clone: SGN-C189126 [TUS-56-P20] Trace: SGN-T338939 EST: SGN-E538064 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538061Length: 836 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538061 [] (trimmed) GGGCCCCCCCTCGAGACATTCCCCGTTTCCATCTGTGTCTAGCATATCAAAATGTTTGTCCGTCCACTTGCCAAACGCCTCAGCGTCATCAACGA
ATTCTTCCATCATTGGACCATCAACAACAACTACACTCATTTTTCGACGATTTCAATTTCAAGTGTTGATTTCTTCTCTCTTTGTTACTATTTCA
TTTATTCTATAAGAATTTGACTTTGTCATTCTTCCTATTCTTTTGGTTGTGGCTTTTTGTTGGTTGATAGGCCATAACTAAAGGTTTTGCCTTAA
ATTCTAGTGAGCCATGTGGGACTTTCTTGCCCTATCAATCTTTCATTATTATTATTATAATGGATTTAAGAATTAAAGTAGAATAGTTTCCACTC
TATACGGGTCTCCCACTAAGATTTAACATAAAATAAGTGGGTTATTTTTCAACCATGCTTTGATCCAAAAGTCAACTCTTGAAAAATATATTTAA
TACTAAACTACTAAAACTACCAGCTATGGCAAAATTGTAAAAGTCGAAATTAAAGATGATTTGAATAAGGTTCAACCTCAACACATTCAAGTCTT
TACGAGAATCTTCAATTGAGCACAAGTAGAGAGAGTAAAGCAATTCATATGCCACAATCTGAAGGGAGTACCGTACCCAAGTAAACAAAGCTAAC
TATAACCTAATAAGTCTAAAATGTGCATACAAGAGATGATAGAGAGAATAACGTGACCAGACCCCTATAATCATACACCACGCATTAACAACAAA
TATCCATTCCCCCGGTGAGATGCCGGTTCATTTGGGGGGGCTTCGATCAGCAAATTTCATCAAATTGAGTTTGTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538061] SGN-U569283 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338936 [Download][View] Facility Assigned ID: TUS56P20_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0008 Quality Trim Threshold: 20.5