EST details — SGN-E538068

Search information 
Request: 538068Match: SGN-E538068
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189130Clone name: TUS-56-P24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189130 [TUS-56-P24] Trace: SGN-T338946 EST: SGN-E538071 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538068Length: 805 bp (863 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538068 [] (trimmed) GTCTAGCATATCAAAATGTTTGTCCGTCCACTTGCCAAACGCCTCAGCGTCATCAACGAATTCTTCCATCATTGGACCATCAACAACAACTACAC
TCATTTTTCGACGATTTCAATTTCAAGTGTTGATTTCTTCTCTCTTTGTTACTATTTCATTTATTCTATAAGAATTTGACTTTGTCATTCTTCCT
ATTCTTTTGGTTGTGGCTTTTTGTTGGTTGATAGGCCATAACTAAAGGTTTTGCCTTAAATTCTAGTGAGCCATGTGGGACTTTCTTGCCCTATC
AATCTTTCATTATTATTATTATAATGGATTTAAGAATTAAAGTAGAATAGTTTCCACTCTATACGGGTCTCCCACTAAGATTTAACATAAAATAA
GTGGGTTATTTTTCAACCATGCTTTGATCCAAAAGTCAACTCTTGAAAAATATATTTAATACTAAACTACTAAAACTACCAGCTATGGCAAAATT
GTAAAAGTCGAAATTAAAGATGATTTGAATAAGGTTCAACCTCAACACATTCAAGTCTTTACGAGAATCTTCAATTGAGCACAAGTAGAGAGAGT
AAAGCAATTCATATGCCACAATCTGAAGGGAGTACCGTACCCAAGTAAACAAAGCTAACTATAACCTAATAAGTCTAAGATGTGCATACAAGAGA
TGATAGAGAGAATAACGTGACCAGACCCCTATAATCATACACCACGCATTAACAACAAATATCCATTCCCCCGGTGAGATGCCGGTTCATTTGGG
GGGCTTCGATCAGCAAATTCATCAAAATTGAGTTTGTCTGAAATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538068] SGN-U569283 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338943 [Download][View] Facility Assigned ID: TUS56P24_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0026 Quality Trim Threshold: 20.5