EST details — SGN-E538089

Search information 
Request: 538089Match: SGN-E538089
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189144Clone name: TUS-57-A14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46878 [cLEI-13-P18] Trace: SGN-T82694 EST: SGN-E268633 Direction: 5' Facility: TIGR
Clone: SGN-C189144 [TUS-57-A14] Trace: SGN-T338963 EST: SGN-E538088 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538089Length: 820 bp (876 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E538089 [] (trimmed) AAGGTAGTAGGTAAGCCGAGTGTTGTCGTACTTTTATGTGGGAGAGGTAGGGGTCTAGTCTCCTCTTCTTTGTATCTGGTAGTAATTTTCAGTAT
TTGCATAGTATCTCCTTCTTCAACTCTTGGTAATACTTGTTGCTACGTTTGCTTTGTTTCTCTTGTCATTTTGCTCTTGTTATTTTCCTTTCAAT
TCTGTTTTGATTACATTTCCTCTGAAAACAACTTCACGAAGGTAAGGTAAGGTAAGGTCTGCGTAAATCCTATCCTTCCAGATAACTAGTATGTA
AATTGGGTCTTAAGGTATTGTTCATGATGCTTATACTAGTATGCAATTTGGGTTGTACATTGTTGTTAATGATGGTCATATTAGTATGGAATTTG
AGGCTCACACTGTAACTTATGATATGACGTTGTTGATGATGCCTAAAATAATCAGTGACACCTAGAAAATAAGGGGAGTCGTTAACATATAGTTT
ATATACATGATACTAGTGTGGAATTTGGACCCTATGCTGTTATTTATTATGCGGTGTTCTTGTTGATGATGCTTATACGTTTAGTATGTGTTCAT
GATGCTCATACTAATATGGAATTTGCGTCTTACACTGTATCGTAATGCTTATACTAACTAAAATTTGGGTTTACATTGTTGTACTTTTGGTAAAT
CCAGAATCCAGATCTATAAATAGGTACATATGTGACAAATATGGAAGTCAAGGTAACAAGGGATTATATGGAACGAATCCGTTAGAGAAAGCGTC
TATAGATCAATGGATAGAGGCAGAAAGACAAAGCTTCAATCCACCAAGTTCAGTTCTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538089] SGN-U564445 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338964 [Download][View] Facility Assigned ID: TUS57A14_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5