EST details — SGN-E538447

Search information 
Request: 538447Match: SGN-E538447
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189382Clone name: TUS-57-K12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C61682 [cLEM-19-C16] Trace: SGN-T86233 EST: SGN-E272235 Direction: 5' Facility: TIGR
Clone: SGN-C189382 [TUS-57-K12] Trace: SGN-T339321 EST: SGN-E538446 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E538447Length: 781 bp (888 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E538447 [] (trimmed) GGTTGAATCTGCACCAGTAGCACCAGTAGAGACTACTCCAGCTGAGGTTGAAGTTACCCCAGCTCCAGAGGTAAACAAGGTAACGTTTAATTATC
TGATCGTCTTATCTAAAAGTTTAATATGTTAAAAGAAGTTACACTTTTAATTACTTAATCATGTTTGTAACATTCGCTTACATGTTATGTTGCTT
GGAATCTTTAAAACTGTGATTGCATGCGTTCCTATCAGATCCTCAGAAAGTAATATAATTTTGAAGGATCTGACACGGATGCAATATTAACATAA
TCTGATTTTTCTTTGCTTGTTCAAACACGTGAAAGTTTTTTTTTTTAATCATAGTAGTGATGTGATTTGAACTCAGGACATCTAACTGCTCTGAT
ATCATATCGAATTTTAAATGATCATATTATTTAAAGTATATATTAATTAACTTAATTATATCTTCAACAGGCGGAGGAACCAGCCCCCGCTGTAG
AAAAGGATGTTGAGGTCGAATCAGCACCAGCACCAGAAGAGGCTGCTCCTGCTGCGGAGGAAGTAGCAGCCCCTGTAGCTGAAGAGCCTGCGGCT
GCAGAACCTGTAGCCGCAGAATCAGAAGAGCCAGTGGCAGTTGCAGCAGAACCTGTTGCAGCTCCAGTTGAAGAACCTGTGGCTGCAGAAGAACC
TGCAGCCGCAGCTGAAGAACCGGTTGCTGCAGCACCCGTTGAGGAGGCTCCAGCACCCGTAGCTGAACCCGAAGCAGCCCCAGTTGCAGAACCCG
AAGCAGAGAAAACAGAGGAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538447] SGN-U579178 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339322 [Download][View] Facility Assigned ID: TUS57K12_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5