EST details — SGN-E538896

Search information 
Request: 538896Match: SGN-E538896
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189660Clone name: TUS-58-G2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73007 [cLER-2-N22] Trace: SGN-T92747 EST: SGN-E279029 Direction: 5' Facility: TIGR
Clone: SGN-C189660 [TUS-58-G2] Trace: SGN-T339774 EST: SGN-E538899 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538896Length: 844 bp (888 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538896 [] (trimmed) AAAAGTAGGACAAAATTTTATTGCATTCAAGCATTTATANTTTTCGGTAACTCGGCTTTTAATAAGCTGTGTTACGCTGAAATACATTCCCGATA
GAGTGCTTGAAAAAGAATATTTATGTTATACAATTTTTCCCTATCTATTATAAGTGTAAAGATGTGTGTATAAATGAGGAACATTTAAGTAGAGG
TGAAGATAAATTAAATTTCATTTATACAAATGTGAGAAAAATGCTTCAATCCTTGGGCCTCTTGCTCATTGATTTTCTCTTGTTCACTTCCAAGT
ATCTCTTTCTTAGCCTAATGGCTTTTGGTGTAACCTCAATAAGCTCATCGGAAGCAACATATCCTATGGCTTCTTCGAGGGACATAAGGCGGGGA
GGAGTTAACTTGACGTTCTCATCCTTGCTAGCGCACCTTATATTGTTGAGTTCTTTTGCCTTAACCGGATTGACATCAAGATCTGTATCCCGAGA
ATGTTCTCCAATAATCATGCCATCATATGTCTCCATTGCAGGTGCCACAAAGAGAACTCCACGAGGTTCTAACCCCATCAGTGCATGAGCAGTGA
TTAACCCACGGCCCATTGATACTAGAACTCCTTTCCTGACATTTCCAAGAGGACCACGATATTTTTCATAAGTCAGAAAAGCTCGATGCATAAAT
CCAGAGCCACGGGTGTCACTGCTGAACACGCTTCTATAGCCCACTAGCCCTCTTNGAGGACATGTCAGACACATTCTAGTCCTTCCCATGCTGCC
AGGAACAGGGCCCATGTCAGTAACTTCACCTCGCCTGTGAGAAAGTGCTTCCATGACCCAAACTACGTGCTCGTCATCAACCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538896] SGN-U580723 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339771 [Download][View] Facility Assigned ID: TUS58G02_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0111 Quality Trim Threshold: 14.5