EST details — SGN-E538955

Search information 
Request: 538955Match: SGN-E538955
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189693Clone name: TUS-58-H11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73313 [cLER-4-E12] Trace: SGN-T92918 EST: SGN-E278085 Direction: 5' Facility: TIGR
Clone: SGN-C189693 [TUS-58-H11] Trace: SGN-T339828 EST: SGN-E538953 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538955Length: 745 bp (868 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E538955 [] (trimmed) GTTTCCTCCTCTGCATTGTCAAAATGATGGGTAGGAATTATGCTGTTCTGTTGGGATTTATTATCTGCATTATCGTAGCTGGGGTTGGAGGTCAA
GCACCTCCAACACCTCCTACTAACCAAGCACCCCCTACCCAAGCACCACCTACACAGGCACCCCCTACTAACCAAGCACCCCCTACCCAGACACC
CCCTACACAGGCACCACCAACACAGGCACCCCCAACACCTACTAACCAAGCACCACCTACACAGGCTCCACCAACACCCACTAACCAGGCTCCTC
CAACACCTACTACCCAAGCACCACCTACACCCACTACCCAAGCTCCACCTACACCCACTGGTTCTCCTCCTCCAGTTAACACCCAAACACCACCG
GCTCAGCCACCACCAACTGCTTCACCACCCCCCACAGTTTCATCCCCACCTCCTGTTGTAACTTCTCCACCACCAGCACCTCCTACTCCTATTGC
TTCTCCTCCTCCACCAGTGAACTCTCCACCTCCTCCAGCAGCACCTTCTCCTGCGCCACTTGCATCAACTCCTGCTCCAGCTCCTGCGAAGAAAT
TGACTTCTCCAGCACCATCTCCTTTAGGATTTAGTCCTCCCGCCCCAGCCCTAGCCCCAAGTCTTGGAGCTTTATCTCCTGCTCCTTCAGCTACT
GATCAGAGCGGAGTAGAGGGCCTGAAATTGTCAACAATGATCGTGAAAAGCTTGGTCTTAGGATGGGGTCTACTCAGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538955] SGN-U572871 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339830 [Download][View] Facility Assigned ID: TUS58H11_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5