EST details — SGN-E538970

Search information 
Request: 538970Match: SGN-E538970
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189703Clone name: TUS-58-H21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73439 [cLER-4-M6] Trace: SGN-T92815 EST: SGN-E277982 Direction: 5' Facility: TIGR
Clone: SGN-C189703 [TUS-58-H21] Trace: SGN-T349019 EST: SGN-E548144 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538970Length: 696 bp (895 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538970 [] (trimmed) GCGTTTCATTTCATAAATCTACAGTTTCTTGAATCAAAAATCTCACTAGATCTTAGCAATACATGCGGTTACAACCAACAATCATGGCACTTCTC
TAACAAAATTGAGATGGTGAAACCGATTTATATGAGATATGTAGAAGACACCCACAGAAGTACATACGTAATCAATGAAGTTGTCACCTCCAAAC
TCCTTGGCCCTTTGAATATGGGAGGAACCACAGACACCATCAAGAATGTCCCCAGAAGCCAAGAAAAAATAAAAGCACCAGCTCCATATAGAAAA
GCTCGAAGTTTGTTCTTTAACCGATCATGAATGAAATACATGGCAGTGATCAGGGAAATGGCAACTTGAAGGGTTGGACCTTCTTCAGTAGGAAA
CAGAACTGTGAGAGCTCCAAGGACTATGAAAGCAATGGAAGTTTTCACAATGAACTTTGTAGCTGGTGTCCTAAACCTGCTAGTAACAGCCTGCA
CAACACGAGATTGCTTCATTTCCCTGACTTTCTTTTTAACGTCAATTTTTGGGTTCTTTCTATCATAGAATTTCTGCATTATTATTTTATCATGG
GCAGCTTCAATTGCATCCACACTTGGTTTATGACCAGCATATCTTTGTATTAGGAAGTTCCTAGCAGCTTGGATTTCATCCTCGGAAGCTTCTAT
ATTGATTCCAAAGTCGTTTGTATGGGTCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538970] SGN-U563193 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339845 [Download][View] Facility Assigned ID: TUS58H21_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5