EST details — SGN-E538986

Search information 
Request: 538986Match: SGN-E538986
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189711Clone name: TUS-58-I5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73475 [cLER-4-P3] Trace: SGN-T92862 EST: SGN-E278029 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E538986Length: 791 bp (849 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E538986 [] (trimmed) GAAAAAGGCAGCAGCTAAAGGAAGCAAAGCTGAACAGAAAGCTAAGAAAAAACAAGTGGATGAAGAAGTATCTAAACTTTCTGCAAAGCTCAAAG
AAGGACATGCTGGGGAACTTGCTTCTTTAGGCTACGGTGATGATAGTAATAATGATAATGGAAAGGATAAAGGGAATCTGGATACATTGGTGAAG
GCCATTGCTGGGGTTTCTGTCAGTAGTCAAACTGACCATTCAAAACCCAGCAAGAGCGTGAAGAGACGTGAGAAAAGAGCTCAACAAGAGGCAGC
CAGAGAGCAGAGAATACAAGAAGAGCAGAGTAATATCATAAGTGATCGGGTTATTGAGAATGAAAAGTTAGAAAGAAAGCTTGAGCCTCTTGGAT
TGACTGTTAACGAAATAAAGCCTGACGGACACTGTCTTTACCGAGCTGTGGAGAATCAGTTGGCCATCCACACTGGCGGTTCATCTCCTTATTCA
TATCTTGAACTGCGACAGATGGTGGCAGCTTACATGAGGAAACATGCAACTGACTTTCTCCCTTTTTTCCTCTCTGAGAATGCAGAAGAAGGAGA
ATCAGATGATTCTCTTGTAGGAAGGTTCGAGAATTACTGTAGAGAAGTTGAGTCAACTGCTGCATGGGGAGGACAACTTGAGCTTGGTGCTTTAA
CTCACATCTTAAAGAAACATATAATGATATTTTCAGGGTCATTTCCTGATGTGGAGATGGGAAAGAATACAAATCCAGCAGTGGCTCTGGCTCTG
GCTCTTCAGCTTTCAGTATAATGCTATCTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538986] SGN-U584736 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339861 [Download][View] Facility Assigned ID: TUS58I05_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5