EST details — SGN-E539071

Search information 
Request: 539071Match: SGN-E539071
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189762Clone name: TUS-58-K8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73833 [cLER-6-G16] Trace: SGN-T93376 EST: SGN-E277646 Direction: 5' Facility: TIGR
Clone: SGN-C189762 [TUS-58-K8] Trace: SGN-T339949 EST: SGN-E539074 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539071Length: 404 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539071 [] (trimmed) AGAGAGGATTTTCAAATAGAAATAGGAAATTGTTGTACAACATCAGATTCCAGATTATTACACATATTTGTTGTTCAAGCAAATGTAGAATGAAG
AAAACTGTGAGTTGAACTTGACATGGAACCTCCGAAATTTTGTGAGCTACTCAGTCGCTCCAATTATCTTGGTCGATCGCAAAAGCTTGCCCTTC
CCTCCCTTCCAATTCCTCAGTAGTGGTTCTACTTGGAGACCACACAAGAATTTTCCTGTCATTACCACCTGTCAATAGTTCCTGGTCCAGTGAAT
TGTACAGACAACAGTTCACATTCTCATAGTGGCCACGTAAATCCATCATCTTTTTGCCCGACCACAAATCAAACGCCTTAGTAGTTGACATGCAT
GGCACAAATACAAGTGTTGAATCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539071] SGN-U569796 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339946 [Download][View] Facility Assigned ID: TUS58K08_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0007 Quality Trim Threshold: 12.5