EST details — SGN-E539230

Search information 
Request: 539230Match: SGN-E539230
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189853Clone name: TUS-58-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69701 [cLER-12-F19] Trace: SGN-T94267 EST: SGN-E283300 Direction: 5' Facility: TIGR
Clone: SGN-C189853 [TUS-58-O3] Trace: SGN-T340103 EST: SGN-E539228 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539230Length: 755 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539230 [] (trimmed) GTGTGATTTCTGCTTGTACTCATTTGAATGCCCTTGATTTTGGGAAAGCAACACATGGATATCTTTTAAGGAACATGACTGGTCTCAATGTTATA
GTAGAGACATCCTTAATAGACATGTATGTTAAATGTGGATGTCTAGAGAAAGGGTTGTTTCTCTTTCAAAGAATGGCAAACAAGAACCAGATGTC
CTATAGTGCCATCATCTCAAGGTTGGCATTGCACAGGCGTGGAGAGGAAGCTCTAAGGATCTACCATGAAATGCTCAAAGCAAGAATAGAACCAG
ATGATGTTGTTTATGTTGGGGTTTTGAGTGCTTGTAGTCATGCTGGACTGGTTGAAGAAGGGCTAAAATGTTTTGACAGGATGAGACTGGAGCAT
CGGATAGAGCCAACAATTCAGCATTATGGGTGTATGGTTGATCTCTTGGGACGAACTGGGAGGCTCAAGGAAGCTTTGGAGCTCATCAAAGGCAT
GCCAATGGAGCCAAATGACGTCTTATGGAGAAGTCTGCTAAGTGCTTGCAGAGTTCATCAGAATGTTGAGTTGGGAGAAGTAGCAGCCAAGAATC
TTTTCATGTTGAAATCAAGAAATGCTAGTGATTATGTGATGCTCTGCAATATATATGCACAAGCTAAAATGTGGGATAAGATGTCTGCAATTCGG
ACAAAGATGGTTAATGAAGGGATAATTCAAGTACCTGGTTCTTGCTTAGTTGAAGCAGACAGAAAACTCTACAAGTTTGTGTCACAAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539230] SGN-U583971 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340105 [Download][View] Facility Assigned ID: TUS58O03_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5