EST details — SGN-E539277

Search information 
Request: 539277Match: SGN-E539277
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189882Clone name: TUS-58-P8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69941 [cLER-13-B16] Trace: SGN-T94668 EST: SGN-E283974 Direction: 5' Facility: TIGR
Clone: SGN-C189882 [TUS-58-P8] Trace: SGN-T340155 EST: SGN-E539280 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539277Length: 635 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539277 [] (trimmed) GGTGCAAAAGACGGTTTAGTTTTACCAAATTCAGTATACTCTATTATGTTGTACACAAGCGGATTTTCACAAAGAATGTGTCAAACAAATGCAAA
CTGCAGTATGTTATGTTGTTAACCAAGGGGCTTTTTCTCCATCAAGCCGCGATAATTGTGTGACCAACTGCAGTCATTGGTAACTCATTTTTTAA
GCAAAATGTATAAAAACACAACTTCAACGAAAAGAGAAACACAAACTATCTTGTTGATTTATCACTAGATGAGGGTGCTTTGGTTACAGATGAAC
TTGTCGACTCTTCAGCTTGCACAAGTTTGCGAAGTCTGTCTTGAAGGACTCTAACTCTGTCTTCTGTTTTGCGGAGCCTTCGCCATCTATAGGCA
AACCAGAGCCCCAATCCTCCGTATACAACAGTATAGGAACCCCAAACATAGGGGTAGGTTTCTGCATTCTCTTTCACTTTCTGGTACTGTTCTTG
TATCTTACCTGCCCAAGTAGTGTATGAGTAACTTTCTGATTGTTTGTCTACTGTAGTTGGTGGTTCAATCACTTCACTCTTCTCCTGAGTCGCCA
TTGTTGGTCCGTTTGGGGGCAGATCCAGGAGGGTCACACCAGTCGTAGGGTTTATCCCGGGTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539277] SGN-U582595 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340152 [Download][View] Facility Assigned ID: TUS58P08_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0010 Quality Trim Threshold: 12.5