EST details — SGN-E539409

Search information 
Request: 539409Match: SGN-E539409
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189957Clone name: TUS-59-C11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70958 [cLER-16-H13] Trace: SGN-T95700 EST: SGN-E284427 Direction: 5' Facility: TIGR
Clone: SGN-C189957 [TUS-59-C11] Trace: SGN-T340281 EST: SGN-E539406 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539409Length: 623 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539409 [] (trimmed) GGAGAGAGAACGCCCTGCTTTTTCTGTGAGCGGTGATTCTTTGTTTTATGTGAAGGATCGATTTCTCCGTGTGTACGAGTATTCAACTCAGAAGG
AGAATCAGTTGATACCAATTAGAAGGCCTGGTTCAAACAGTCTGAACCAAGGTCCACGAACGCTTTCCTACAGTCCTACTGAGAATGCTATTTTG
ATCTGTTCGGACGTTGATGGGGGCTCCTATGAACTATACATTATACCTAAAGACACTTATGGTAGGGGTGATACTGTTCAAGATGCCAAAAGGGG
AACTGGAGGATCAGCAGTTTTTGTTGCTCGGAACAGGTTTGCAGTGCTTGAGAAAAGCACCAACCAAGTCCTGGTCAAGAATCTGAAGAATGAAA
TTGTTAAGAAAAGCCCTCTGCCTACTGCTACTGATGCAATATTCTATGCTGGCACAGGAAACTTACTGTGCAGGGCAGAGGACAGAGTTGTTATC
TTTGATCTGCAGCAGAGAATTGTTCTTGGAGAGCTGCAGACTCCTTTCATCATGTATGTCGTTTGGTCGTCCGACATGGAAAGTGGTGGCTTTGC
TTAGCAAGCATTCCATTGTAATAGCTGACAAGAAACTTGTGCACCGTTGTACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539409] SGN-U586425 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340284 [Download][View] Facility Assigned ID: TUS59C11_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0022 Quality Trim Threshold: 20.5