EST details — SGN-E539411
| Search information |
| Request: 539411 | Match: SGN-E539411 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189960 | Clone name: TUS-59-C14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
See unigene SGN-U581121 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C70979 [cLER-16-I10] | Trace: SGN-T95670 | EST: SGN-E284397 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189960 [TUS-59-C14] | Trace: SGN-T340289 | EST: SGN-E539414 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E539411 | Length: 720 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539411 [] (trimmed)
AGCCCCATCAACAGGTCGATGAAAATGATACAAGATGTTTCCATACATAGGAATAAATATATAGACGACAACAGATCTTATAAGAACAGGACAGC
TTTTCTTTTATCTAATACCCCGATAACTATTTTGAAGCACTAGTGACATAATACACCCAGCCTATGACACCTGCATTCCTGTCCATCTAGTATCC
TTAGCATTGTATTGTTAAAAAGGTTTTCAAATTTCTTAATAAATATGCTGTCACAAAATAGAATACATGATTCATTACAGAAGGGACGTAAAATT
ACGTGTATGAGGTGAAGGACTATGTAGATTTTTACTCAGGAGAATCGTAACAAGATATTGAAAGACCTGCCAACAAGCAGCGAACAATCAATTTG
CTGTTGTTTTAGACATGGCCTGCTTGACAGCCTCAGCGTATGTCCTGTGTTGGTATGTGAGTGTGGATTCTAGCAAGTCCCATAAGGAAGTCTTT
GGGTTCCAACCAAGCTGCCTGTTGATTATGGTCATGTCCGGAATCCTCTTGTCACTGTCATCATACCCCTCACCATAAAATTCTTTAGAACTTAC
ATCAATGGTGGGTGTTTCAATAGAAGACTCTCCACTCACCTTAGCATACACCTTAGTCATCATTTCAGCCAGCTGCCTGACAGTAACTTCATTGT
TAGGGTTACAAACATAAAGATATGGCCATTGGCTCTGGCAGGATTTTCGATCATT
TTTTCTTTTATCTAATACCCCGATAACTATTTTGAAGCACTAGTGACATAATACACCCAGCCTATGACACCTGCATTCCTGTCCATCTAGTATCC
TTAGCATTGTATTGTTAAAAAGGTTTTCAAATTTCTTAATAAATATGCTGTCACAAAATAGAATACATGATTCATTACAGAAGGGACGTAAAATT
ACGTGTATGAGGTGAAGGACTATGTAGATTTTTACTCAGGAGAATCGTAACAAGATATTGAAAGACCTGCCAACAAGCAGCGAACAATCAATTTG
CTGTTGTTTTAGACATGGCCTGCTTGACAGCCTCAGCGTATGTCCTGTGTTGGTATGTGAGTGTGGATTCTAGCAAGTCCCATAAGGAAGTCTTT
GGGTTCCAACCAAGCTGCCTGTTGATTATGGTCATGTCCGGAATCCTCTTGTCACTGTCATCATACCCCTCACCATAAAATTCTTTAGAACTTAC
ATCAATGGTGGGTGTTTCAATAGAAGACTCTCCACTCACCTTAGCATACACCTTAGTCATCATTTCAGCCAGCTGCCTGACAGTAACTTCATTGT
TAGGGTTACAAACATAAAGATATGGCCATTGGCTCTGGCAGGATTTTCGATCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539411] | SGN-U581121 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340286 [Download][View] | Facility Assigned ID: TUS59C14_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
