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EST details — SGN-E539524

Search information 
Request: 539524Match: SGN-E539524
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190024Clone name: TUS-59-F6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71802 [cLER-19-C7] Trace: SGN-T96526 EST: SGN-E284954 Direction: 5' Facility: TIGR
Clone: SGN-C190024 [TUS-59-F6] Trace: SGN-T340396 EST: SGN-E539521 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539524Length: 776 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539524 [] (trimmed) TTTTGTTTCTCTACTCCAATTGGGTGTTTTTTGTTTTTCTTTTTGTGTATCCATAAATGGGTAGTGAAACAAAGGTTTATACTTTGCAAGAAGTA
GCTCCTCACAACAATGCCAAAGATTGTTGGCTTGTTATTAGTGGCAAGGTGTACGATGTGACAAAGTTCTTGGACGATCACCCTGGTGGCGATGA
GGTTTTATTAGCTGCTACTGGAAAGGATGCAACCGATGATTTTGAGGATGTTGGTCACAGCAGCAGTGCTCGAGCCATGTTGGACGAGTACTACG
TAGGGGATATTGATTCAGCAACCATCCCGACTAAAAAGGCGTACACTCCTCCCAATCAGCCTCATTACAATCAGGACAACACATCCGAATTCATA
ATCAAGCTACTCCAGTTCTTAGTTCCCCTGATCATTTTGGGCGTAGCAGTTGGCATCCGCTTCTACACCAAACAATCCTCTTGAAGATTGAATGC
AACGGTAAATAAATTCATAATAAGAGTTCGAATTTGCAAGATGTCACCCTCGATTCAAAAAAAATATATATCGAATTTTACTTCTTAGACTTCAT
ATAGTCGTATGTTCTTGTTGTAATAGATTGTTGAGTCATCCTATAGAGTGTGGATTCGAGATTTTAATCTCGAGACGTTTCAACATTTTTAAGCT
TTTTAGTATTGAATTCGACGTAGCTTTGAAATTATGGGTTCAAAACTTGATATTTGTTGAAACTATTGAGTTCAGTCAAACCTATTAGTCAAAAG
TTGTTAATGTACTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539524] SGN-U576176 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340399 [Download][View] Facility Assigned ID: TUS59F06_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0082 Quality Trim Threshold: 14.5