EST details — SGN-E539714

Search information 
Request: 539714Match: SGN-E539714
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190136Clone name: TUS-59-J22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77612 [cLES-2-K24] Trace: SGN-T97146 EST: SGN-E281986 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E539714Length: 437 bp (879 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539714 [] (trimmed) AAAATTAATTTTGAGATTTCAATTGAAACATTGAAAATGAAAGGATATGACAACCCATATCCTTTCATATTCCCATTTACTTGAAGAAAAAAAAA
AAAGGAAAAATAATAATATACTAGATTAGCTAAAATTAAAACTAAAACTATGAACAGAATTTTAATTTTCCCATTTTACCCTTTCTACTACTTGG
CCAAAAATCTACCCCTTCCAAGTGAAATTACAAAAAAGGGGCTGTTACATTAAACTACATTGCTGTTTTCCATGAATGATTCAAGGGTAGGAAAG
GCAAAAAAAAAGCTACAATCAAATCCACACGAGCCACCATCAACCACCACATCCGCCGCCGTTTGGGGGTGCGCCGGCATGGGTTCCCCTGACTG
TTCCAGTAAAAAAACTGACGTGTCAAGTGTAGGCAAAAAACAACCAGGCTGTAGCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539714] SGN-U585515 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340589 [Download][View] Facility Assigned ID: TUS59J22_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.901 Expected Error Rate: 0.0096 Quality Trim Threshold: 12.5