EST details — SGN-E539749

Search information 
Request: 539749Match: SGN-E539749
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190155Clone name: TUS-59-K17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77734 [cLES-3-B9] Trace: SGN-T97711 EST: SGN-E284690 Direction: 5' Facility: TIGR
Clone: SGN-C190155 [TUS-59-K17] Trace: SGN-T340621 EST: SGN-E539746 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539749Length: 580 bp (930 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539749 [] (trimmed) GAGCCAAGTTGTTCGTATGCTTGAATCAGAGGAATATCCCATACCAAGAGAGGATCGAAGGCAACGAAGATCTCAAGCAGGTAACGGGGAGAGTG
ATTCTCAAAACTATGACACTGACAAGAGTGACAACCCAGATCCAAGGTCTGAAAGTAGAAGAAGCCATCAAGTATAACCATCAAAGACACATCTT
TCTGGTCTTTCATGAGAAGTGTGCCATAACAAAGCTTTCATTATAATGAAAGTCTACGGGATCAAATGAGTAGGACGATGAACTGTTTCTGCTGG
TATATTGTTGGTCAGAAGAGATTGACTACTTTTCTTCTCCCTTCAAGGGTTCTATTCTTTCTTAATATCTTTTATTTGTATCTTGTTTTTTTCTT
CTTTATTTTGGTTCTTTCCTTGTATGAAAGTAGATAGGGAGTAAATTGTTGTGGACTTAATGGTCATGTAACTAAACTGGAAGCAATCAGGGGCG
GGGGTTTGTGTACAGAAGAATTTCTTGCTTCGGTATTCAACATTATTCAAGTAGTATTGTAATTTATTTTCTTCTAAAGTGAATACCATGGGTTT
AAATTCTAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539749] SGN-U584803 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340624 [Download][View] Facility Assigned ID: TUS59K17_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0054 Quality Trim Threshold: 12.5