EST details — SGN-E539752

Search information 
Request: 539752Match: SGN-E539752
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190157Clone name: TUS-59-K19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77752 [cLES-3-C5] Trace: SGN-T97751 EST: SGN-E284730 Direction: 5' Facility: TIGR
Clone: SGN-C190157 [TUS-59-K19] Trace: SGN-T340625 EST: SGN-E539750 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539752Length: 839 bp (931 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539752 [] (trimmed) CAAAAATGGCTAATGTAATGAAGCCTCTGATGAATTGGCCAAAATGGCATCACTATTTATACGTTCGCGCTTCATTCATCCACTTTGTTCAATCT
CAATCTCAATCTCCACTCTTCTCAACCTGCAATGTTCGCCGACTGCCGTCGTTCACGGCATCACCTTCCGGTTACCGGCAAGCTCATTTTCGTTC
CGGCGCGGCACTTAAATCACGTGAAAGTCCATTACCGTTAGATCAATCAGAGGGCGACAGCGATTCCGATGAAAAAACAAGGAAGAGTCGTAACG
AGAAGAAGCGTGAAGCTCGACGCGCCGTCCGGTGGGCTATGGATTTAGCTAAGTTCTCTGCTCCTCAAATTAAGCGCATTCTCAGAGTGGCTTCA
ACGGAGCAAGAGGTATACGAAGCCGTTATGCTGGCCAAGAGACTAGGTCCTGATGTACGAGAAGGAAAGCGAAGGCAATTCAGTTACATAGGTAG
ATTATTGCGAGAAGTTAAGCCTGAATTGATGGATGGTTTAATTCAGGCAACAAAAGATGGAGACCAAACTAAATTTCAGGCTTTATCTGGTTCGG
AACTTTCGGCTACCGAAGATGTTGATGAGGAAGTTGAAGAGACTGAATATGAGGATGACGAAGAGAGTTCTGAGGACAATATTGCTTTAGCCGAT
AGATGGTTTGATGGCTTGGTCAATAAGGACGTTGACATCTCTAAAGAATCTATTCTCTAAGTGAGGTTGATTTTGATCGCCCAGGAGTACGTGGT
CTTGTTAGGAATGTACAATCAATACGTGAAAAAAGGGAGCAATCAGACGAAGGGGAAGGGAAAGTAAACACTGATGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539752] SGN-U570482 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340627 [Download][View] Facility Assigned ID: TUS59K19_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5